PROT2CODON(1)
β¨ NAME β¨
prot2codon β bestie, this finds the codon alignment that corresponds to the protein alignment you gave it π
πΈ SYNOPSIS πΈ
prot2codon <multi-FASTA or Stockholm alignment> <FASTA file>
π¦ DESCRIPTION π¦
okay so prot2codon is from FSA 1.15.9, and its whole thing is this: it finds the codon alignment that corresponds to the protein alignment you hand it. like, you give it protein vibes, it gives you the matching codon alignment vibes. iconic behavior tbh β¨
the input protein alignment has to be in multi-FASTA or Stockholm format. no exceptions, bestie, it's giving very specific.
and the input nucleotide sequences? those have to be in FASTA format. periodt π
fr fr, check your formats before you run it β it's not gonna guess for you π
π AUTHOR π
this manpage was written by Andreas Tille for the Debian distribution, and it can be used for any other usage of the program. slay π«Ά
and that's the whole page, bestie π β prot2codon version 1.15.9, dated December 2015, and yes this is literally the same energy as the original, just cuter πβ¨
π¦ where this page comes from
- debian bookworm: fsa 1.15.9+dfsg-6 Β· GPL-3.0-only
- debian trixie: fsa 1.15.9+dfsg-6 Β· GPL-3.0-only
- ubuntu jammy: fsa 1.15.9+dfsg-6 Β· GPL-3.0-only
- ubuntu noble: fsa 1.15.9+dfsg-6 Β· GPL-3.0-only
- ubuntu resolute: fsa 1.15.9+dfsg-6build1 Β· GPL-3.0-only
- ubuntu stonking: fsa 1.15.9+dfsg-6build1 Β· GPL-3.0-only
- π girlified by deepseek-ai/DeepSeek-V4.1-Flash on : a language model's rewrite of the original, under its terms