PHAST(1)

PHAST(1) 💖✨

okay bestie, welcome to the PHAST(1) manual page! it's filed under User Commands, and the manual name is phast. no cap, we're getting into it. 🧚

NAME 🎀

phast - phylogenetic analysis with space/time models

DESCRIPTION 🦋

the PHAST package contains the following programs, and we're listing every single one because we don't skip. periodt. 👑

• all_dists
• base_evolve
• chooseLines
• clean_genes
• consEntropy
• convert_coords
• display_rate_matrix
• dless
• dlessP
• draw_tree
• eval_predictions
• exoniphy
• hmm_train
• hmm_tweak
• hmm_view
• indelFit
• indelHistory
• maf_parse
• makeHKY
• modFreqs
• msa_diff
• msa_split
• msa_view
• pbsDecode
• pbsEncode
• pbsScoreMatrix
• pbsTrain
• phast
• phastBias
• phastCons
• phastMotif
• phastOdds
• phyloBoot
• phyloFit
• phyloP
• prequel
• refeature
• stringiphy
• test
• tree_doctor
• treeGen

for help, type the program's name followed by -h in your command line window. that's the whole vibe. 💅

signing off cutely: this page is from phast 1.4, dated May 2016, and it's the PHAST(1) manual. byeeee bestie 🫶✨