PDB_CHKENSEMBLE(1)

πŸ“¦
version 2.5.1 Β· 3 versions
, in debian trixie, ubuntu questing

✨ NAME ✨

pdb_chkensemble β€” okay bestie, this is the manual page for pdb_chkensemble version 2.5.1 πŸ’…


πŸ¦‹ DESCRIPTION πŸ¦‹

ngl, the first thing it says is this:

pdb_chkensemble File not found or not readable: '--help'

yeah girl, that's literally what it prints, don't ask me why πŸ™ˆ

Okay so what this lil icon actually does: it checks that all the models in a multi-model PDB file have the same composition ✨

And when we say "composition," we mean the same atoms/residues/chains β€” like, everyone's gotta match, no cap πŸ’–

πŸŽ€ Usage:

python pdb_chkensemble.py <pdb file>

πŸ“ Example:

python pdb_chkensemble.py 1CTF.pdb

Now for the lore, because it's giving origin story:

This program is part of the pdb-tools suite of utilities and should not be distributed isolatedly. fr fr, keep the squad together πŸ‘‘

The pdb-tools were created to quickly manipulate PDB files using the terminal, and they can be used sequentially, with one tool streaming data to another 🌈 it's a whole pipeline moment, main character energy

They're based on old FORTRAN77 code that was taking too much effort to maintain and compile. RIP πŸ’€πŸͺ¦


and that's the whole page bestie, ily, go check those ensembles 🫢

this was pdb_chkensemble 2.5.1, from September 2024, hanging out in the User Commands section β€” PDB_CHKENSEMBLE(1), periodt πŸ’…βœ¨

πŸ“¦ where this page comes from