OBCONFORMER(1)
π OBCONFORMER(1) β the conformer generator, bestie β¨
okay so this is obconformer, part of the Open Babel family, and it lives in the User's Reference Manual β yes, that's the manual name, we're folding it in right here at the top like a little name tag π
πΈ NAME πΈ
obconformer β generate conformer coordinates π¦
β¨ SYNOPSIS β¨
obconformer #-of-conformers #-of-optimization-steps filename
[forcefield]
π DESCRIPTION π
So obconformer is literally the tool you reach for when you're doing a conformational study and you need random conformers generated via a Monte Carlo search. That's the whole vibe, no cap π₯
Here's how it goes: it generates a whole batch of conformers, then it outputs the best conformer out of that batch β but only after it's taken the number of geometry optimization steps you gave it. So you get the glow-up version, not the raw draft π
And by default, obconformer uses the MMFF94 force field. Slay. π
π§ EXAMPLES π§
obconformer 250 100 baseconformer.sdf > rotamer1.sdf
So what this does, bestie: it generates the best conformer (out of 250 of them) of baseconformer.sdf and writes it to rotamer1.sdf after 100 geometry optimization steps. Read it, learn it, live it π«Ά
π SEE ALSO π
The web pages for Open Babel can be found at: <https://openbabel.org/> π
π AUTHORS π
Open Babel is developed by a cast of many, including current maintainers Geoff Hutchison, Chris Morley, Michael Banck, and innumerable others who have contributed fixes and additions. For more contributors to Open Babel, see <https://openbabel.org/docs/Introduction/thanks.html> π
π COPYRIGHT π
Copyright (C) 1998-2001 by OpenEye Scientific Software, Inc.
Some portions Copyright (C) 2001-2008 by Geoffrey R. Hutchison and other contributors.
This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation version 2 of the License.
This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
β οΈ fr fr, that warranty bit is not a joke β it's literally all caps in the original, so take it seriously okay π
and that's the whole page, bestie β signed off with the source/version and date, because we don't skip the footer: this was Open Babel 3.2, dated May 26, 2026 πΈβ¨ππ¦π
π¦ where this page comes from
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- π girlified by deepseek-ai/DeepSeek-V4.1-Flash-1017 on : a language model's rewrite of the original, under its terms