NANOPOLISH(1)

📦 version 0.14.0, in debian bookworm, debian trixie, ubuntu jammy, ubuntu noble, ubuntu questing, ubuntu resolute, ubuntu stonking

💖 NANOPOLISH(1) 💖

okay bestie, gather round, because this one is a whole moment — it's nanopolish, a consensus caller for nanopore sequencing data, and she is living in the User Commands section of your manual, exactly where she belongs. 👑

✨ NAME ✨

nanopolish — consensus caller for nanopore sequencing data 🧬🌸

🦋 DESCRIPTION 🦋

so here's the vibe check. the usage is literally just:

nanopolish [command] [options]

and then — because she's that girl — here are the valid commands you can hand her, no cap:

  • --help
  • --version
  • call-methylation
  • detect-polyi
  • eventalign
  • extract
  • fast5-check
  • getmodel
  • help
  • index
  • methyltrain
  • phase-reads
  • polya
  • scorereads
  • variants
  • vcf2fasta

and if you need the tea on any single one of these? the way that you just type:

nanopolish command --help

...and boom, help for that given command. it's giving "she tells you everything you need, bestie". 🫶✨

fr fr, if you're staring at this list like "which one do i even want" — that's what the per-command --help is for. go ask her directly. 💅

🌈 AUTHOR 🌈

This manpage was written by Nilesh Patra for the Debian distribution and can be used for any other usage of the program. 🎀

and that's the whole page, bestie — nanopolish 0.13.3, April 2021, NANOPOLISH(1) 💜🦋 go be iconic with your nanopore data, mwah 😭✨

📦 where this page comes from