mia-2dseries-mincorr(1)

💖 mia-2dseries-mincorr — bestie edition 💖

the manual for mia-2dseries-mincorr(1), from the General Commands Manual section. yes we're doing this, sit down, hydrate 🫶

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✨ NAME ✨

mia-2dseries-mincorr — Evaluate minimal correlation of time-intensity curves.

okay so literally what it says on the tin, no cap.

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✨ SYNOPSIS ✨

mia-2dseries-mincorr -i <in-set> -o <out-set> [options]

that's the whole vibe. -i in, -o out, sprinkle options like glitter 💅

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✨ DESCRIPTION ✨

mia-2dseries-mincorr — bestie, you hand it a set of images of temporal sucession (a lil series over time, main character energy), and this program evaluates the minimal correlation of the time-intensity curve between neighboring pixels. like, for each pixel it's looking at how its intensity wiggles over time vs. the wiggles of the pixels next to it, and it keeps the minimum correlation. iconic behavior honestly 🔥

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✨ OPTIONS ✨

• -i, --in-set=(input, required); string — the input segmentation set. you GOTTA give it, it's required, it's giving non-negotiable 🌸
• -o, --out-set=(output, required); io — the output image of minimal correlation. also required, bestie, no skipping.

For supported file types see PLUGINS:2dimage/io

• -k, --skip=2 — skip images at the beginning of series. default is 2, so two images get ghosted by default 👻

🎀 Help & Info 🎀

• -V, --verbose=warning — verbosity of output, print messages of given level and higher priorities. Supported priorities starting at lowest level are:
  • trace ‐ Function call trace
  • debug ‐ Debug output
  • info ‐ Low level messages
  • message ‐ Normal messages
  • warning ‐ Warnings
  • fail ‐ Report test failures
  • error ‐ Report errors
  • fatal ‐ Report only fatal errors
• --copyright — print copyright information
• -h, --help — print this help
• -?, --usage — print a short help
• --version — print the version number and exit

🦋 Processing 🦋

• --threads=-1 — Maxiumum number of threads to use for processing. This number should be lower or equal to the number of logical processor cores in the machine. (-1: automatic estimation). so like, -1 means "girl just figure it out" ✨

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🌈 PLUGINS: 2dimage/io 🌈

here's the plug-in roster, the whole friend group:

• bmp — BMP 2D-image input/output support. The plug-in supports reading and writing of binary images and 8-bit gray scale images. read-only support is provided for 4-bit gray scale images. The color table is ignored and the pixel values are taken as literal gray scale values.

Recognized file extensions: .BMP, .bmp

Supported element types:

• binary data, unsigned 8 bit

• datapool — Virtual IO to and from the internal data pool

Recognized file extensions: .@

• dicom — 2D image io for DICOM

Recognized file extensions: .DCM, .dcm

Supported element types:

• signed 16 bit, unsigned 16 bit

• exr — a 2dimage io plugin for OpenEXR images

Recognized file extensions: .EXR, .exr

Supported element types:

• unsigned 32 bit, floating point 32 bit

• jpg — a 2dimage io plugin for jpeg gray scale images

Recognized file extensions: .JPEG, .JPG, .jpeg, .jpg

Supported element types:

• unsigned 8 bit

• png — a 2dimage io plugin for png images

Recognized file extensions: .PNG, .png

Supported element types:

• binary data, unsigned 8 bit, unsigned 16 bit

• raw — RAW 2D-image output support

Recognized file extensions: .RAW, .raw

Supported element types:

• binary data, signed 8 bit, unsigned 8 bit, signed 16 bit, unsigned 16 bit, signed 32 bit, unsigned 32 bit, floating point 32 bit, floating point 64 bit

• tif — TIFF 2D-image input/output support

Recognized file extensions: .TIF, .TIFF, .tif, .tiff

Supported element types:

• binary data, unsigned 8 bit, unsigned 16 bit, unsigned 32 bit

• vista — a 2dimage io plugin for vista images

Recognized file extensions: .-, .V, .VISTA, .v, .vista

Supported element types:

• binary data, signed 8 bit, unsigned 8 bit, signed 16 bit, unsigned 16 bit, signed 32 bit, unsigned 32 bit, floating point 32 bit, floating point 64 bit

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🌸 EXAMPLE 🌸

Evaluate the minimal correlation image of a series givemn in segment.set and store the image in OpenEXR format. Skip two images at the beginning of the series.

mia-2dseries-mincorr -i segment.set -o mincorr.exr -k 2

see? simple. ate that fr fr 💅

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👑 AUTHOR(s) 👑

Gert Wollny — the icon, the legend, the moment.

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💜 COPYRIGHT 💜

This software is Copyright (c) 1999‐2015 Leipzig, Germany and Madrid, Spain. It comes with ABSOLUTELY NO WARRANTY and you may redistribute it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3 (or later). For more information run the program with the option '--copyright'.

no warranty bestie, read the license, it's giving legally binding and also kind of gorgeous 🎀

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and that's the whole page!! brought to you from the USER COMMANDS section, version v2.4.7, and yes the page is literally called mia-2dseries-mincorr(1) — mwah, bye, go compute some correlations 💖✨🦋