MECAT2PCAN(1)

💖 MECAT2PCAN(1) 💖

User Commands · mecat2pcan — bestie, this is your girl's lil' helper for chopping up consensus hits 💅

✨ NAME ✨

mecat2pcan — partition consensus hits into smaller parts 🎀

✨ SYNOPSIS ✨

mecat2pcan [options] seqdb_dir  pcan_dir  cns_hits

✨ DESCRIPTION ✨

Okay so picture this: you got a big ol' pile of consensus hits and they're just a lot, right? mecat2pcan is a command line tool whose whole entire job — its main character arc, if you will — is to partition consensus hits into small parts 🌈✨

That's it. That's the vibe. She splits, she partitions, she serves. 🫶

🌸 OPTIONAL ARGUMENTS: 🌸

• -p <Integer, >0> — number of reads in each part. Default = 100000 💖
• -k <Integer, >0> — number of parts processed at each round. If <0, then it will be set to the system limit value 👑 Default = 100
• -t <Integer, >0> — number of CPU threads. Default = 1 ⚡

lowkey these are all optional bestie, but like… they're also giving "please tune me" energy, yk? 🙈

And that's the whole page, no cap. This lil' icon is mecat2pcan, born July 2020, living her best life as MECAT2PCAN(1) 🦋✨ mwah, go partition something 💋💖