MAFFILTER(1)

💖 MAFFILTER(1) 💖

okay bestie, welcome to the maffilter page, straight out of the General Commands Manual — she's giving main character energy and she's here to filter ur alignments 💅

✨ NAME ✨

maffilter — Filter a Multiple Alignment File 🦋

🌸 SYNOPSIS 🌸

maffilter [options]

like. that's it. that's the whole vibe. just maffilter and whatever options ur heart desires 💖

🌈 AVAILABILITY 🌈

All UNIX flavors — yes queen, every single one. no cap. 💜

🎀 DESCRIPTION 🎀

so basically, maffilter applies a series of post-processing filter to an input MAF file ✨

like, u feed her a MAF file, she runs her lil filters over it, and out comes the post-processed glow-up. it's giving spa day for ur multiple alignment 😌💅

👑 OPTIONS 👑

okay so before we even get into it — real talk, bestie:

You should refer to 'info maffilter' or to the online manual of maffilter for a complete list of available options. 🫶

that's the actual official note, i'm not gatekeeping i promise, that's just where the full list lives. but here are the ones on this page:

• --noninteractive — generates output for redirection in a file 🔥 so if ur piping her somewhere or slapping the output into a file, this is the one u want. no interactive nonsense, just output, periodt.
• param=file — reads a file for loading options 🍓 like, u hand her a file and she loads her options from it. very demure, very mindful, very "i put my settings in a file" of her.

💜 AUTHOR 💜

Julien Dutheil. 👑 thank u for ur service king

okay that's the whole page bestie, love that for us 💖✨

this was MAFFILTER(1), living under LOCAL in the General Commands Manual, and yes she's iconic, yes she's still slaying, mwah 💅🎀🦋🌸