GTF_TO_SAM(1)

📦
version 2.2.1 · 3 versions
, in debian bookworm, ubuntu jammy

okay so bestie, welcome to the GTF_TO_SAM(1) manual page, filed under User Commands. it's giving main character energy already. 💅

✨ NAME ✨

the NAME line is gtf_to_sam - component of cufflinks suite, so yeah, it's literally a component of cufflinks suite. periodt. 💖

🌸 SYNOPSIS 🌸

cufflinks [options] <transcripts1.gtf,...,transcriptsN.gtf> <out.sam>

like, that's the shape of it, no cap. ✨

🦋 DESCRIPTION 🦋

so the description is giving: gtf_to_sam v2.2.1 linked against Boost version 107400. that's the tea. ☕

and then there's this iconic little dashed line doing its own thing:

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lowkey obsessed with the drama of it. 💅

🎀 OPTIONS 🎀

  • -r/--reference-seq — reference fasta file. default is [ default: NULL ] — yes, NULL, bestie, that's the default vibe. 🌸
  • -F/--raw-fpkm — use FPKM instead of isoform fraction. iykyk, that's the switch. 🦋

and that's the whole page, fr fr. this masterpiece is from gtf_to_sam 2.2.1+dfsg.1-9, dated November 2021, and it lives as GTF_TO_SAM(1). slay, bye bestie 👑💖

📦 where this page comes from