GT-UNIQUESUB(1)

📦
version 1.6.6 · 5 versions
, in ubuntu resolute, ubuntu stonking

🌸 NAME 🌸

okay bestie, meet gt-uniquesub — it computes the length of minimum unique prefixes. that's it, that's the whole gig 💅

✨ SYNOPSIS ✨

gt uniquesub [options ...] -query queryfile [...]

💖 DESCRIPTION 💖

so here's the whole menu of flags, no skips, no gatekeeping 🫶

  • -fmi [string] — specify the fmindex (default: undefined) 🦋
  • -esa [string] — specify the suffix array (default: undefined) ✨
  • -pck [string] — specify the packed index (default: undefined) 🎀
  • -query — specify queryfiles 🔥
  • -min [value] — only outputs the length if it's >= the given minimum length (default: 0) 👑
  • -max [value] — only outputs the length if it's ⇐ the given maximum length (default: 0) 🌈
  • -output — set output flags (sequence, querypos) 💜
  • -help — display help and exit 🙈
  • -version — display version information and exit ⭐

🧚 ADDITIONAL INFORMATION 🧚

for the detailed information, please refer to the manual of uniquesub — it's giving "go read the source of truth," and honestly? iconic 💖

🐛 REPORTING BUGS 🐛

found a bug? report it to <kurtz@zbh.uni-hamburg.de> — they're the main character handling that inbox 😭

k that's the whole page, no cap. this was GenomeTools 1.6.6, dated 11/09/2025, and you just read GT-UNIQUESUB(1) from the GenomeTools Manual — slay, go compute some unique prefixes 💅✨🦋
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