GT-INLINESEQ_SPLIT(1)

📦
version 1.6.6 · 5 versions
, in ubuntu resolute, ubuntu stonking

okay so bestie, this is the manual page for GT-INLINESEQ_SPLIT(1) from the GenomeTools manual, and it's literally giving "split GFF3 annotations with inline sequences into separate files" energy. No cap, we're gonna go through every single bit. 💅✨

✨ NAME ✨

gt-inlineseq_split — Split GFF3 annotations with inline sequences into separate files.

🌸 SYNOPSIS 🌸

gt inlineseq_split (-seqfile <seqfile> | -gff3file <gff3file>) [GFF3_file]

💖 DESCRIPTION 💖

okay so here's the tea: this tool takes your GFF3 annotations with inline sequences and splits them into separate files. The options are right here, and the synopsis has a (-seqfile <seqfile> | -gff3file <gff3file>) thing going on — very "pick your path" energy. 😭

  • -seqfile [string] — output file for sequences as FASTA (default: undefined)
  • -gff3file [string] — output file for annotations as GFF3 (default: undefined)
  • -help — display help and exit
  • -version — display version information and exit

Also, the synopsis has [GFF3_file] just hanging out at the end. No extra lore needed. 🦋

🐛 REPORTING BUGS 🐛

found a bug? not cute. Report bugs to https://github.com/genometools/genometools/issues. The GenomeTools girlies will handle it. 🫶

mwah 💋 this was GenomeTools 1.6.6, dated 11/09/2025, and the manual page was GT-INLINESEQ_SPLIT(1). bye bestie, go split those sequences! 🌈💖

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