GT-GFF3_TO_GTF(1)

πŸ“¦
version 1.6.6 Β· 5 versions
, in ubuntu resolute, ubuntu stonking

πŸ’– NAME πŸ’–

gt-gff3_to_gtf β€” bestie, this one parses your GFF3 file(s) and shows them to you as GTF2.2. That's it, that's the whole vibe. ✨


🌸 SYNOPSIS 🌸

gt gff3_to_gtf [GFF3_file ...]

πŸŽ€ DESCRIPTION πŸŽ€

okay so like, you hand it one or more GFF3 files (or don't, she's flexible) and she gives you back GTF2.2. here's the whole menu of little flags you can sprinkle on top, no cap:

  • -o [filename] β€” redirects the output into the file you name (default: undefined, so like, she just doesn't)
  • -gzip [yes|no] β€” writes the output as a gzip compressed file (default: no)
  • -bzip2 [yes|no] β€” writes the output as a bzip2 compressed file (default: no)
  • -force [yes|no] β€” forces writing to the output file, like she's being so brave about it (default: no)
  • -help β€” displays help and exits, the classic "bestie explain urself" button πŸ’…
  • -version β€” displays version information and exits
lowkey important: for -gzip and -bzip2 and -force, the value is yes or no. yes means yes. no means no. periodt. πŸ’€

πŸ¦‹ REPORTING BUGS πŸ¦‹

found a bug? don't suffer in silence bestie, report it to https://github.com/genometools/genometools/issues. the devs will eat, they're obsessed with fixing things 🫢


and that's the whole page!! this was GenomeTools 1.6.6, dated 11/09/2025, and the page itself is GT-GFF3_TO_GTF(1) β€” ily, go parse something iconic πŸ‘‘πŸ’–

πŸ“¦ where this page comes from