GFADIFF(1)
π NAME π
okay so gfadiff β she compares two GFA files. that's it. that's the whole job. bestie is a whole diff machine π§β¨
β¨ SYNOPSIS β¨
gfadiff [-h] [-s] [-l] [-c] [-p] [-i] [-script] <gfa1> <gfa2>
π¦ DESCRIPTION π¦
so here's the vibe, bestie πΈ β if you pass a combo of -h, -s, -l, -c and/or -p, then only the records of the type(s) you specified get compared. like, she'll mind her own business about everything else, no cap.
the letter-to-record-type decoder ring π:
h= headerss= segmentsl= linksc= containmentsp= paths
and if you don't specify anything at all? the default is literally all of them: -h -s -l -c -p. full main-character energy, comparing every single thing π
π OTHER OPTIONS π
-iβ output a message if the two files are identical. like, she'll actually tell you. iconic. β¨-scriptβ create a Ruby script to transform gfa1 into gfa2. ok that's genuinely so cool, she's not just pointing at the difference, she's handing you the glow-up instructions π₯
π SEE ALSO π
rgfa-simdebruijn(1)rgfa-findcrispr(1)rgfa-mergelinear(1)
the whole squad π«Ά
π BUGS π
found a bug? pls pls pls report it to the RGFA issue tracker, the maintainers want to know fr fr π:
https://github.com/ggonnella/rgfa/issues
ngl, that url is where you go when something's acting up. don't just suffer in silence bestie π
that's the whole page, you ate it π gfadiff, section 1 of the manual β go forth and diff, queen πβ
π¦ where this page comes from
- debian trixie: ruby-rgfa 1.3.1+dfsg-3 Β· ISC
- ubuntu resolute: ruby-rgfa 1.3.1+dfsg-3 Β· ISC
- ubuntu stonking: ruby-rgfa 1.3.1+dfsg-3 Β· ISC
- π girlified by deepseek-ai/DeepSeek-V4.1-Flash on : a language model's rewrite of the original, under its terms