GENOME(1)

📦
version 0.06 · 3 versions
, in ubuntu noble, ubuntu resolute, ubuntu stonking

💖 GENOME(1) — bioinformatics tools for genomics 💖

okay bestie, listen — this is the manual page for genome, from the User Contributed Perl Documentation corner of the world. It's a whole tree of genomics tooling and it's honestly kind of iconic. Let's get into it. 🧬✨

✨ NAME ✨

genome — bioinformatics tools for genomics, fr fr 🦋

✨ SYNOPSIS ✨

# get a top-level list
genome

# see the MuSiC tools
genome music

# run the MuSiC smg-test tool (for example)
genome music smg-test

see how easy that is?? you just keep drilling down like it's a group chat and you're scrolling to find the message. 💅

✨ DESCRIPTION ✨

So the genome command gives you command-line access to any of the genome modeling tools which are installed on the current system. Not some — any. Whatever's on your machine is what you get. 🌈

Every installed tool group is a sub-command. That's the whole architecture, and honestly? Clean. No cap. 👑

Just type genome and press Enter for the top-level list, then drill down from there. That's it. That's the vibe check. 🎀

✨ DEVELOPMENT ✨

Wanna grow the tree? Installing any new Perl module with a name starting with Genome::Model::Tools will add to the tree. That's the plug-in mechanism, bestie — no config files, no registration, it just appears. Not me being obsessed with a naming convention as an API. 😭💖

✨ AUTHORS ✨

The glow-up credits! 🫶 This software is developed by the analysis and engineering teams at The Genome Center at Washington Univiersity in St. Louis, with funding from the National Human Genome Research Institute. Richard K. Wilson, P.I. 🌟

And now the icons, the main characters, the whole squad — every single one of them:

  • Scott Abbott
  • Travis Abbott
  • Edward Belter
  • Paul Bender
  • Anthony Brummett
  • Todd C. Carter
  • Matthew Callaway
  • C.J. Carey
  • Lynn Carmichael
  • Ken Chen
  • Eric Clark
  • Kevin Crouse
  • Indraniel Das
  • Nathan Dees
  • Eric deMello
  • Brian Derickson
  • Alice Diec
  • David Dooling
  • Feiyu Du
  • Adam Dukes
  • James Eldred
  • Xian Fan
  • Ian Ferguson
  • Chris Harris
  • Amy Hawkins
  • Todd Hepler
  • Xin Hong
  • Shunfang Hou
  • Jasreet Hundal
  • Erik Hvatum
  • Mark Johnson
  • Krisha-Latha Kanchi
  • Cyriac Kandoth
  • Phil Kimmey
  • Michael Kiwala
  • Daniel Koboldt
  • Karthik Kota
  • Kim Kyung
  • David Larson
  • Sai Lek
  • Shawn Leonard
  • Shin Leong
  • Ling Lin
  • Justin Lolofie
  • Robert Long
  • Charles Lu
  • John Martin
  • Josh McMichael
  • Rick Meyer
  • Thomas Mooney
  • William Nash
  • Nathan Nutter
  • Ben Oberkfell
  • John Osborne
  • Josh Peck
  • Jerome Peirick
  • Craig Pohl
  • Ryan Richt
  • Noorus Sahar Abubucker
  • Gabriel Sanderson
  • William Schierding
  • Jon Schindler
  • William Schroeder
  • Christopher Schuster
  • Xiaoqi Shi
  • Scott Smith
  • Sasi Suruliraj
  • Kenneth Swanson
  • Jason Walker
  • John Wallis
  • Jim Weible
  • Mike Wendl
  • Todd Wylie

SEVENTY-THREE NAMES AND EVERY ONE OF THEM ATE. periodt. 💅🌈

✨ LICENSE ✨

Copyright (C) 2007-2011 Washington University in St. Louis.

It is released under the Lesser GNU Public License (LGPL) version 3. See the associated LICENSE file in this distribution. 📜 (yes bestie, read the license, it's giving responsible queen energy 🎀)

✨ BUGS ✨

Found a defect with any software in the genome namespace? Don't suffer in silence — contact genome-dev ~at~ genome.wustl.edu. 💌 (note the ~at~ situation, that's on purpose, don't @ me)

🦋 that's the whole page, bestie. go type genome, press Enter, and start drilling. you got this. ✨

made with love for perl v5.36.0, dated 2022-10-14 — yeah she's a lil vintage but she still slays 💖🌸

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