fundisp(1)
π fundisp(1) π
okay bestie, welcome to the SAORD Documentation corner of the universe, where today's main character is fundisp β the little tool that just displays your data and does it gorgeously. let's get into it π
β¨ NAME β¨
fundisp β display data in a Funtools data file π¦
π SYNOPSIS π
fundisp [-f format] [-l] [-n] [-T] <iname> [columnsβͺbitpix=n]
π OPTIONS π
-fβ a format string for display, so you can control exactly how things look β¨-lβ display the image as a list containing the columnsX,Y,VALπ-nβ don't output the header (no header, no problem) π-F [c]β use the specified charactercas the column separator (default: space) πΈ-Tβ output in rdb/starbase format, which means tab separators π₯
π¦ DESCRIPTION π¦
okay so fundisp displays the data in the specified FITS Extension and/or Image Section of a FITS file, or in a Section of a non-FITS array or raw event file. she's versatile, she's flexible, she's giving range. π
The first argument to the program specifies the FITS input image, array, or raw event file to display. If "stdin" is specified, data are read from the standard input. Use Funtools Bracket Notation to specify FITS extensions, image sections, and filters. periodt.
π displaying columns π
If the data being displayed are columns (either in a FITS binary table or a raw event file), the individual rows are listed. Filters can be added using bracket notation. Thus:
[sh] fundisp "test.ev[time-(int)time>.15]"
X Y PHA PI TIME DX DY
------- ------- ------- --------- ---------------- ---------- ----------
10 8 10 8 17.1600 8.50 10.50
9 9 9 9 17.1600 9.50 9.50
10 9 10 9 18.1600 9.50 10.50
10 9 10 9 18.1700 9.50 10.50
8 10 8 10 17.1600 10.50 8.50
9 10 9 10 18.1600 10.50 9.50
9 10 9 10 18.1700 10.50 9.50
10 10 10 10 19.1600 10.50 10.50
10 10 10 10 19.1700 10.50 10.50
10 10 10 10 19.1800 10.50 10.50
NB: The FITS binary table test filetest.ev, as well as the FITS imagetest.fits, are contained in the funtoolsfuntestdirectory. iykyk π
When a table is being displayed using fundisp, a second optional argument can be used to specify the columns to display. For example:
[sh] fundisp "test.ev[time-(int)time>=.99]" "x y time"
X Y TIME
-------- -------- ---------------------
5 -6 40.99000000
4 -5 59.99000000
-1 0 154.99000000
-2 1 168.99000000
-3 2 183.99000000
-4 3 199.99000000
-5 4 216.99000000
-6 5 234.99000000
-7 6 253.99000000
The special column $REGION can be specified to display the region id of each row:
[sh $] fundisp "test.ev[time-(int)time>=.99&&annulus(0 0 0 10 n=3)]" 'x y time $REGION'
X Y TIME REGION
-------- -------- --------------------- ----------
5 -6 40.99000000 3
4 -5 59.99000000 2
-1 0 154.99000000 1
-2 1 168.99000000 1
-3 2 183.99000000 2
-4 3 199.99000000 2
-5 4 216.99000000 2
-6 5 234.99000000 3
-7 6 253.99000000 3
Here only rows with the proper fractional time and whose position also is within one of the three annuli are displayed. she's filtering, she's thriving β¨
π excluding columns π
Columns can be excluded from display using a minus sign before the column:
[sh $] fundisp "test.ev[time-(int)time>=.99]" "-time"
X Y PHA PI DX DY
-------- -------- -------- ---------- ----------- -----------
5 -6 5 -6 5.50 -6.50
4 -5 4 -5 4.50 -5.50
-1 0 -1 0 -1.50 0.50
-2 1 -2 1 -2.50 1.50
-3 2 -3 2 -3.50 2.50
-4 3 -4 3 -4.50 3.50
-5 4 -5 4 -5.50 4.50
-6 5 -6 5 -6.50 5.50
-7 6 -7 6 -7.50 6.50
All columns except the time column are displayed. bye time column, you're not invited π«Ά
The special column $N can be specified to display the ordinal value of each row. Thus, continuing the previous example:
fundisp "test.ev[time-(int)time>=.99]" '-time $n'
X Y PHA PI DX DY N
------- -------- -------- ---------- ----------- ----------- ----------
5 -6 5 -6 5.50 -6.50 337
4 -5 4 -5 4.50 -5.50 356
-1 0 -1 0 -1.50 0.50 451
-2 1 -2 1 -2.50 1.50 465
-3 2 -3 2 -3.50 2.50 480
-4 3 -4 3 -4.50 3.50 496
-5 4 -5 4 -5.50 4.50 513
-6 5 -6 5 -6.50 5.50 531
-7 6 -7 6 -7.50 6.50 550
Note that the column specification is enclosed in single quotes to protect'$n'from begin expanded by the shell. (yes bestie, protect your$nat all costs, the shell WILL come for her π)
πΈ the rules for activating + de-activating columns πΈ
In general, the rules for activating and de-activating columns are:
- If only exclude columns are specified, then all columns but the exclude columns will be activated.
- If only include columns are specified, then only the specified columns are activated.
- If a mixture of include and exclude columns are specified, then all but the exclude columns will be active; this last case is ambiguous and the rule is arbitrary.
In addition to specifying columns names explicitly, the special symbols + and - can be used to activate and de-activate all columns. This is useful if you want to activate the $REGION column along with all other columns. According to the rules, the syntax "$REGION" only activates the region column and de-activates the rest. Use "+ $REGION" to activate all columns as well as the region column. π
π§ displaying image data π§
If the data being displayed are image data (either in a FITS primary image, a FITS image extension, or an array file), an mxn pixel display is produced, where m and n are the dimensions of the image. By default, pixel values are displayed using the same data type as in the file. However, for integer data where the BSCALE and BZERO header parameters are present, the data is displayed as floats. In either case, the display data type can be overridden using an optional second argument of the form:
bitpix=n
where n is 8,16,32,-32,-64, for unsigned char, short, int, float and double, respectively. β¨
Of course, running fundisp on anything but the smallest image usually results in a display whose size makes it unreadable. Therefore, one can uses bracket notation (see below) to apply section and/or blocking to the image before generating a display. For example:
[sh] fundisp "test.fits[2:6,2:7]" bitpix=-32
2 3 4 5 6
---------- ---------- ---------- ---------- ----------
2: 3.00 4.00 5.00 6.00 7.00
3: 4.00 5.00 6.00 7.00 8.00
4: 5.00 6.00 7.00 8.00 9.00
5: 6.00 7.00 8.00 9.00 10.00
6: 7.00 8.00 9.00 10.00 11.00
7: 8.00 9.00 10.00 11.00 12.00
Note that is is possible to display a FITS binary table as an image simply by passing the table through funimage first:
[sh] ./funimage test.ev stdout βͺ fundisp "stdin[2:6,2:7]" bitpix=8
2 3 4 5 6
------- ------- ------- ------- -------
2: 3 4 5 6 7
3: 4 5 6 7 8
4: 5 6 7 8 9
5: 6 7 8 9 10
6: 7 8 9 10 11
7: 8 9 10 11 12
π the -l list switch π
If the -l (list) switch is used, then an image is displayed as a list containing the columns: X, Y, VAL. For example:
fundisp -l "test1.fits[2:6,2:7]" bitpix=-32
X Y VAL
---------- ---------- -----------
2 2 6.00
3 2 1.00
4 2 1.00
5 2 1.00
6 2 1.00
2 3 1.00
3 3 5.00
4 3 1.00
5 3 1.00
6 3 1.00
2 4 1.00
3 4 1.00
4 4 4.00
5 4 1.00
6 4 1.00
2 5 1.00
3 5 1.00
4 5 1.00
5 5 3.00
6 5 1.00
2 6 1.00
3 6 1.00
4 6 1.00
5 6 1.00
6 6 2.00
2 7 1.00
3 7 1.00
4 7 1.00
5 7 1.00
6 7 1.00
π the -n nohead switch π
If the -n (nohead) switch is used, then no header is output for tables. This is useful, for example, when fundisp output is being directed into gnuplot. π
β default display formats β
The fundisp program uses a default set of display formats:
datatype TFORM format
-------- ----- --------
double D "%21.8f"
float E "%11.2f"
int J "%10d"
short I "%8d"
byte B "%6d"
string A "%12.12s"
bits X "%8x"
logical L "%1x"
Thus, the default display of 1 double and 2 shorts gives:
[sh] fundisp snr.ev "time x y"
β¦and the rows just keep on coming, bestie, like:
TIME X Y
--------------------- -------- --------
79494546.56818075 546 201
79488769.94469175 548 201
...
Okay so now for the glow-up part π
β you can change the display format for individual columns, or for all the columns of a given data type, using the -f switch. The format string that comes with -f is a space-delimited list of keyword=format values. Each keyword is either:
- a column name β in which case that format applies only to that one column, or
- a FITS table TFORM specifier β in which case the format applies to every column with that data type.
So for example, you can change the double and short formats for all columns like this:
[sh] fundisp -f "D=%22.11f I=%3d" snr.ev "time x y"
and it gives you:
TIME X Y
---------------------- --- ---
79494546.56818075478 546 201
79488769.94469174743 548 201
...
Or alternatively π¦, you can change the format of just the time and x columns like this:
[sh] fundisp -f "time=%22.11f x=%3d" snr.ev "time x y"
which gives you:
TIME X Y
---------------------- --- --------
79494546.56818075478 546 201
79488769.94469174743 548 201
...
π¨ okay but here's the plot twist: name collisions
There's a potential conflict if a column has the same name as one of the TFORM specifiers. In the examples above, the X column in the table has the same name as the X (bit) datatype. The way this gets resolved: the format string is processed so that TFORM datatype specifiers are checked for first, using a case-sensitive comparison. If the specified format value is not an upper case TFORM value, then a case-insensitive check is made on the column name.
Which means, in the examples above, X=%3d refers to the X (bit) datatype, while x=%3d refers to the X column:
[sh] fundisp -f "X=%3d" snr.ev "x y"
X Y
-------- --------
546 201
548 201
...
[sh] fundisp -f "x=%3d" snr.ev "x y"
X Y
--- --------
546 201
548 201
...
So as a rule π: always specify the column name in lower case and TFORM data types in upper case. Periodt.
πΈ scope: one run vs. every run
The -f [format] changes the format for a single execution of fundisp. But you can also use the FUN_FORMAT environment variable to change the format for all invocations of fundisp. The value of that environment variable uses the exact same format as the -f switch. And if you want to be extra, that global value can be overridden in individual cases by using the -f [format] switch.
β οΈ Caveats, bestie, listen up: it is the user's responsibility to match the format specifier to the column data type correctly. Also, in order to maintain visual alignment between names and columns, the column name will be truncated (on the left) if the format width is less than the length of the name. However, truncation is not performed if the output is in RDB format (using the -T switch).
π the deprecated format string (ngl it's giving legacy)
An older-style format string is supported but deprecated. It consists of space-delimited C format statements for all data types, specified in the following order:
double float int short byte string bit.
This order of the list is based on the assumption that people generally will want to change the float formats. π
If - is entered instead of a format statement for a given data type, the default format is used. Also, the format string can be terminated without specifying all formats, and defaults will be used for the rest of the list. Note that you must supply a minimum field width, i.e., "%6d" and "%-6d" are legal, "%d" is not legal.
By using -f [format], you can change the double and short formats like this:
[sh] fundisp -f "22.11f - - 3d" snr.ev "time x y"
TIME X Y
---------------------- --- ---
79494546.56818075478 546 201
79488769.94469174743 548 201
...
NB: This format is deprecated and will be removed in a future release. π
π the -F[c] switch (separator slay)
The -F[c] switch lets you specify a (single-character) column separator β the default is a space. But heads up: column formatting will almost certainly also add spaces to pad individual columns to the required width. Those extra spaces can be removed with a program such as sed, at the cost of generating unaligned columns. For example:
fundisp -F',' snr.ev'[cir 512 512 .1]'
X, Y, PHA, PI, TIME, DX, DY
512, 512, 6, 7, 79493997.45854475, 578, 574
512, 512, 8, 9, 79494575.58943175, 579, 573
512, 512, 5, 6, 79493631.03866175, 578, 575
512, 512, 5, 5, 79493290.86521725, 578, 575
512, 512, 8, 9, 79493432.00990875, 579, 573
fundisp -F',' snr.ev'[cir 512 512 .1]' | sed 's/ *, */,/g'
X,Y,PHA,PI,TIME,DX,DY
512,512,6,7,79493997.45854475,578,574
512,512,8,9,79494575.58943175,579,573
512,512,5,6,79493631.03866175,578,575
512,512,5,5,79493290.86521725,578,575
512,512,8,9,79493432.00990875,579,573
fundisp -f "x=%3d y=%3d pi=%1d pha=%1d time=%20.11f dx=%3d dy=%3d" -F',' snr.ev'[cir 512 512 .1]' | sed 's/ *, */,/g'
X,Y,A,I,TIME,DX,DY ---,---,-,-,--------------------,---,---
512,512,6,7,79493997.45854474604,578,574
512,512,8,9,79494575.58943174779,579,573
512,512,5,6,79493631.03866174817,578,575
512,512,5,5,79493290.86521725357,578,575
512,512,8,9,79493432.00990875065,579,573
π the -T switch (rdb era)
If the -T (rdb table) switch is used, the output will conform to starbase/rdb data base format: tabs will be inserted between columns rather than spaces. This format is not available when displaying image pixels β except in conjunction with the -l switch.
π GTI filters, aka the main character move
Finally, note that fundisp can be used to create column filters from the auxiliary tables in a FITS file. For example, the following shell code will generate a good-time interval (GTI) filter for X-ray data files that contain a standard GTI extension:
#!/bin/sh
sed '1,/---- .*/d
/^$/,$d' | awk 'tot>0{printf "||"};{printf "time="$1":"$2; tot++}'
If this script is placed in a file called "mkgti", it can be used in a command such as:
fundisp foo.fits"[GTI]" | mkgti > gti.filter
The resulting filter file can then be used in various funtools programs:
funcnts foo.fits"[@gti.filter]" ...
to process only the events in the good-time intervals. Obsessed, honestly. β¨
π«Ά SEE ALSO π«Ά
See funtools(7) for a list of Funtools help pages. iykyk π
and that's a wrap, bestie β this was fundisp from version 1.4.5, dated April 14, 2011, page fundisp(1). go forth and format your columns, you absolute icon ππ
π¦ where this page comes from
- debian bookworm: funtools 1.4.8-1 Β· GPL
- debian trixie: funtools 1.4.8-1.1+b2 Β· GPL
- ubuntu jammy: funtools 1.4.8-1 Β· GPL
- ubuntu noble: funtools 1.4.8-1.1build2 Β· GPL
- ubuntu questing: funtools 1.4.8-2
- ubuntu resolute: funtools 1.4.8-2build1 Β· GPL
- ubuntu stonking: funtools 1.4.8-2build1 Β· GPL
- π girlified by deepseek-ai/DeepSeek-V4.1-Flash on : a language model's rewrite of the original, under its terms