cut-range(1)

✨ NAME ✨

cut-range — the girl who picks lines out of a whole pile of input files, based on lines that have key = value in them 💅

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🎀 SYNOPSIS 🎀

cut-range filename1.fastas [filename2.fastas ...]  [OPTIONS]

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🌸 DESCRIPTION 🌸

Okay so bestie, listen. cut-range selects lines from multiple input files. And how does it decide which lines? Based on lines containing key = value. That's it, that's the whole vibe. Multiple files in, selected lines out. Periodt. ✨

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👑 ALL OPTIONS: 👑

• -h, --help — produces the help message. Your girl is confused? Ask for help, no shame, it's giving self-care 🫶
• --key arg (=iterations) — cut based on the values of key=value. The default arg is iterations, so if you don't say anything it just rolls with that 💖
• --skip arg — the number of samples to skip. Just like, look away from the first few, they're not the moment 🙈
• --until arg — the last sample to use. It's the cutoff, the final boss, the last one invited to the party 🎉
• --size arg — maximum number of samples to use. A hard cap, a limit, a boundary, and honestly? Respect 💅
• --verbose — outputs more log messages on stderr. Not stdout, bestie, stderr, write that down 😭

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🔥 EXAMPLES: 🔥

Say you wanna select alignments after the first 100 iterations, and you got two different runs. Do this:

% cut-range --skip=100 run-1/C1.P1.fastas run-2/C1.P1.fastas > P1.fastas

Both runs in, --skip=100 doing its little thing, everything funneled into P1.fastas. Ate. No crumbs. 👑

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💀 REPORTING BUGS: 💀

Found a bug? Not the vibe, but we handle it.

BAli-Phy online help: http://www.bali-phy.org/docs.php

Please send bug reports to bali-phy-users@googlegroups.com — the inbox is open, the girls are listening 🫶

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🦋 AUTHORS 🦋

Benjamin Redelings. Iconic behavior, honestly. 💜

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This whole little love letter to cut-range is from the BAli-Phy crew, dated Feb 2018 — and that's the cut-range(1) manual page, wrapped up with a bow 🎀 bye bestie, go cut some ranges 💖