COD2RDF(1)

💖 COD2RDF 💖

okay bestie, welcome to cod2rdf — it's a section 1 general commands manual page, so it's a command you run in your shell. sit down, grab a boba, we're gonna describe COD structures in RDF together 🦋

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✨ NAME ✨

cod2rdf — describe (in RDF format) properties of COD structures. that's it, that's the whole job. she describes things. in RDF. about COD structures. 💅

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🌸 SYNOPSIS 🌸

cod2rdf --options 1000000 "[1-9][0-9]6"

like... yes. that's literally how you call her. the numbers are doing numbers. iconic. ✨

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🫶 DESCRIPTION 🫶

Describe (in RDF format) properties of COD structures.

no fr, that's the whole vibe. you point her at a COD database, she hands you back RDF describing the properties of the structures in it. main character energy, zero drama. 👑

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🎀 OPTIONS 🎀

so many options. we love a command with range. every single one is below, no cap, nothing skipped. 💜

• -d, --database cod — use the database "cod" to query for structures.
• -h, --host www.crystallography.net — the host. it's giving www.crystallography.net by default.
• -s, --server www.crystallography.net — query the COD database on the host 'www.crystallography.net'.
• -l, --localhost — use the database server on the localhost to query the COD database. staying home, cozy, valid. 🏠
• -p, --port 3306 — use the specified port to query structures (default: 3306).
• --platform mysql — use the specified SQL platform (default: 'mysql').
• -u, --user cod_reader — use user name "cod_reader" to access the COD database. this user should have at least the SELECT privilege, i.e. should be able to read the COD database, without supplying a password.
• --password — use the specified password to connect (default: ''). yes, the default is an empty string, she's lowkey unbothered.
• --vocabulary-namespace cod — use vocabulary namespace "cod" to prefix properties native to the queried database.
• --vocabulary-url-prefix http://www.crystallography.net/cod/doc/rdf/ — specify URL prefix for the database's native namespace.
• --prefix, --db-url-prefix http://www.crystallography.net/cod/ — specify URL prefix for all objects in the queried database.
• --postfix, --db-url-postfix .html — specify URL postfix for all objects in the queried database.
• --def-table, --definition-table databases — look "databases" table for descriptions of remote databases.
• --db-name, --database-name cod — use "cod" as the abbreviation of queried databases. this abbreviation is used in construction of cross-referencing table names, i.e. "pubchem_x_cod".
• --from — generate RDFs for all database entries starting at specified entry and ending at either the entry specified using '--to' command line option or the last entry in the database.
• --to — generate RDFs for all database entries from either the entry specified using '--from' command line option or the first entry in the database.
• --range — generate RDFs for all database entries in the specified range. range should be specified in the form 'X-Y', where X is the first and Y is the last entry.
• --revision — generate RDFs for all database entries deposited in the specified or older Subversion revision of the database.
• --split-author-names — split author names in internal database representation at semicolons (';') to produce RDF-parsable list of author names. each author in such list is marked with "author" property instead of "authors", which is used for non-split value (default).
• --no-split-author-names, --dont-split-author-names — make no assumptions about internal database representation of author list.
• --xml-output — output RDF in XML carrier format (default).
• --n3-output — output RDF in N3 (Notation3) carrier format.
• --turtle-output — output RDF in Turtle carrier format. 🐢 yes the format is literally named turtle, we stan.
• --ntriples-output, --n-triples-output — output RDF in N-Triples carrier format.
• --replace-utf-codepoints-from — replace Unicode code points starting at specified point with carrier format-specific entities.
• --no-replace-utf-codepoints, --dont-replace-utf-code-points — leave Unicode code points unescaped (default).
• --html-utf-escapes — escape Unicode code points using HTML hexadecimal format corresponding to '&#x%04X;' formatted string (default).
• --internal-utf-escapes — escape Unicode code points using internal format corresponding to '\u%04X' formatted string.
• --utf-escape-format — escape Unicode code points using format corresponding to the provided formatted string.
• --help, --usage — output a short usage message (this message) and exit. she's helpful like that 🫶
• --version — output version information and exit.

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😭 REPORTING BUGS 😭

found a bug? do not suffer in silence, bestie. report cod2rdf bugs using e-mail: cod-bugs@ibt.lt

fr fr, if something's broken, tell them. they wanna know. 💌

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okay and that's the whole page!! you read all of it, you're literally a Unix scholar now, no cap. 🎓✨

this was COD2RDF(1) from the General Commands Manual — section 1, general commands, the classic. mwah. 💅 🦋 🌸