CIF_SYMOP_APPLY(1)
π NAME π
okay so bestie, gather round: cif_symop_apply β she applies symmetry operator(s) to all the atoms in a CIF. every single one. no atom left behind, periodt. π¦
this is the cif_symop_apply(1) manual page from the General Commands Manual, and we're about to make it make sense, fr fr.
β¨ SYNOPSIS β¨
cif_symop_apply --options input1.cif input*.cif
like. give her some options, give her some CIF files, and watch her go. input1.cif is your main girl and input*.cif is the whole friend group she's bringing along π
πΈ DESCRIPTION πΈ
Apply symmetry operator(s) to all atoms in a CIF.
that's it. that's the whole vibe. the way she just does that. π
π OPTIONS π
-s,--symop,--symmetry-operator-x,-y,zβ Apply the specified symmetry operator. this is the main character right here, you hand her the operator and she uses it. β¨-a,--add-symop,--add-symmetry-operator-x,-y,zβ Add the specified symmetry operator to the applied operator list. notice the difference bestie:-ssets,-aadds. she's stacking them. she's building a whole collection. π«Ά--use-perl-parserβ Use development CIF parser written in Perl. the dev build, the experimental one, the indie darling π--use-c-parserβ Use faster C/Yacc CIF parser. Default. she's faster, she's the standard, she's literally the one running unless you say otherwise. no cap. π₯--help,--usageβ Output a short usage message (this message) and exit. she tells you how to use her and then she dips π--versionβ Output version information and exit. just the facts, then out the door π«
π REPORTING BUGS π
found a bug? don't be shy, don't suffer in silence, report cif_symop_apply bugs using e-mail: cod-bugs@ibt.lt
she wants to hear about it, for real. constructive criticism is self-care π
okay that's the whole page, you're basically a cif_symop_apply expert now, i'm so proud ππ
this has been CIF_SYMOP_APPLY(1) from the General Commands Manual, part of the cod-tools era of life, and that closing date on the page? it's a little time capsule β sending you love from whenever that footer got stamped. stay symmetrical, bestie β¨ππ¦
π¦ where this page comes from
- debian trixie: cod-tools 3.11.0+dfsg-1 Β· LGPL-3.0-only
- ubuntu noble: cod-tools 3.8.1+dfsg-1build3 Β· LGPL-3.0-only
- ubuntu questing: cod-tools 3.11.0+dfsg-1
- ubuntu resolute: cod-tools 3.11.0+dfsg-2build1 Β· LGPL-3.0-only
- ubuntu stonking: cod-tools 3.12.0+dfsg-2 Β· LGPL-3.0-only
- π girlified by deepseek-ai/DeepSeek-V4.1-Flash on : a language model's rewrite of the original, under its terms