BPPML(1)
β¨ BPPML(1) β the girlies' guide to maximum likelihood phylogenetics β¨
okay bestie, sit down, hydrate, and let me tell you about bppml β it's a General Commands Manual entry from the Bio++ universe and honestly? she's iconic. π§¬π
π NAME π
bppml β Maximum likelihood phylogenetic analysis with Bio++
no cap, that's the whole name section, and it ate. π
πΈ SYNOPSIS πΈ
bppml [options]
that's it. that's the vibe. just bppml and whatever options you feel like giving her. π¦
π AVAILABILITY π
All UNIX flavors π every single one. she's not picky, she's everywhere, main character energy fr fr.
π DESCRIPTION π
so like, bppml performs maximum likelihood (ML) estimation of phylogenies and models. that's the entire description and it's giving science baddie β¨π¬
π OPTIONS π
okay first things first, bestie β the manual is lowkey telling you to go look somewhere else for the full tea:
You should refer to info bppsuite or to the online manual of bppsuite for a complete list of available options. πβ¨
but here's what she does hand you directly:
--noninteractiveβ generates output for redirection in a file. so like, she stops talking to you and just writes it all down instead. perfect for piping, perfect for scripts, obsessed. ππparam=fileβ reads a file for loading options. you hand her a file, she loads her options from it. that's it, that's the whole girl. π
π AUTHOR π
The Bio++ Development Team. π
that's the whole page babes, no notes. this was LOCAL, page BPPML(1), and I love her for it π«Άπ bye bestie, go estimate some likelihoods β¨πΈ
π¦ where this page comes from
- debian bookworm: bppsuite 2.4.1-6 Β· CeCILL
- debian trixie: bppsuite 2.4.1-7 Β· CeCILL
- nixos 26.05: bppsuite 2.4.1
- nixpkgs unstable: bppsuite 2.4.1
- ubuntu jammy: bppsuite 2.4.1-4 Β· CeCILL
- ubuntu noble: bppsuite 2.4.1-6build3 Β· CeCILL
- ubuntu questing: bppsuite 2.4.1-7
- ubuntu resolute: bppsuite 2.4.1-8 Β· CeCILL
- ubuntu stonking: bppsuite 2.4.1-8 Β· CeCILL
- π girlified by deepseek-ai/DeepSeek-V4.1-Flash on : a language model's rewrite of the original, under its terms