BP_SEQCONVERT(1)

💖 NAME 💖

okay so welcome to BP_SEQCONVERT(1), bestie — the user-contributed Perl documentation page for bp_seqconvert, aka the generic BioPerl sequence format converter. No cap, that's the name and the whole gig — it's here to slay. 🦋✨

✨ SYNOPSIS ✨

Run it like this, copy-paste style:

bp_seqconvert --from in-format --to out-format < file.in-format > file.out-format
# or
bp_seqconvert -f in-format -t out-format < file.in-format > file.out-format

🌸 DESCRIPTION 🌸

The way that this script just gives you a command line interface to Bio::SeqIO from BioPerl? Iconic. That's literally the description, and it's lowkey all you need to know for the vibe check. 💅

🦋 SEE ALSO 🦋

• Bio::SeqIO — the BioPerl module this page keeps talking about.
• bp_sreformat.PLS — similar functionality, and it also supports AlignIO. Not me being obsessed with options. 👑

💌 FEEDBACK 💌

📬 Mailing Lists 📬

User feedback is an integral part of the evolution of this and other Bioperl modules, fr fr. Send your comments and suggestions preferably to the Bioperl mailing list — your participation is much appreciated. 🫶

• bioperl-l@bioperl.org — General discussion
• http://bioperl.org/wiki/Mailing_lists — About the mailing lists

🐛 Reporting Bugs 🐛

Report bugs to the Bioperl bug tracking system to help keep track of the bugs and their resolution. Bug reports can be submitted via the web at:

• https://github.com/bioperl/bioperl-live/issues

👑 AUTHOR - Philip Lijnzaad 👑

This one's by Philip Lijnzaad. Email: <p.lijnzaad-at-med.uu.nl> 💌

mwah 💋 this page is brought to you by perl v5.42.3, dated 2021-02-03, and it's still giving BP_SEQCONVERT(1) main character energy. periodt.