ASNMACRO(1)

✨ ASNMACRO(1) ✨

ok so this is asnmacro, from the NCBI Tools User's Manual bestie πŸ’– it lives in section 1 of the manual, and we're gonna get you fluent in it, no cap.


🌸 NAME 🌸

asnmacro β€” process ASN.1 biological data per Sequin macros πŸ¦‹


πŸŽ€ SYNOPSIS πŸŽ€

asnmacro [-] [-b] [-d] [-e] [-i filename] [-k n] [-l n] -m filename
[-o filename] [-p path] [-r path] [-s str] [-x str]

πŸ’… DESCRIPTION πŸ’…

okay so picture this: asnmacro is a command-line tool that runs Sequin macros on annotated biological sequence data πŸ’– and that data is represented according to NCBI's ASN.1 specifications. that's the whole vibe. it's giving "let me automate your sequence annotation grind" and honestly? iconic. πŸ‘‘


✨ OPTIONS ✨

here's the full rundown, and yes bestie, we're doing every single one, no skipping πŸ™ˆ

  • - β€” print the usage message. just a lil "hey here's how you use me" moment 🫢
  • -b β€” input is Binary πŸ”’
  • -d β€” output is binary πŸ’Ύ
  • -e β€” input is a Seq-Entry 🧬
  • -i filename β€” single input file, one and only one πŸŽ€
  • -k n β€” skip steps ⏭️
  • -l n β€” limit steps πŸ›‘
  • -m filename β€” macro file. this one is required, it's the main character of the whole synopsis fr fr πŸ‘‘
  • -o filename β€” single Output file πŸ“
  • -p path β€” path to multiple input files 🌈
  • -r path β€” path for Results when you're processing multiple files πŸ“‚
  • -s str β€” suffix for stripped (output) files βœ‚οΈ
  • -x str β€” suffix for input files used with -p (it's .sqn by default, so you don't gotta say it if you don't wanna πŸ’…)

🫢 AUTHOR 🫢

The National Center for Biotechnology Information. shoutout to the NCBI, they really said "we'll build the whole tool" and ate πŸ’–


πŸ‘€ SEE ALSO πŸ‘€

  • Psequin(1). β€” go read that one too bestie, it's the sister page 🌸

and that's the tea β˜• this page is from NCBI, dated 2016-09-01, and it's ASNMACRO(1) all day every day. slay, go run some macros, and remember: read the manual, then read it again πŸ’–βœ¨πŸ¦‹

πŸ“¦ where this page comes from