APBS(1)

✨ NAME ✨

apbs - Adaptive Poisson Boltzmann Solver 🦋

🎀 SYNOPSIS 🎀

apbs [options] parameters-file

Okay so the vibe is simple: type apbs, toss in whatever options you want, then hand it your parameters file. No cap 💅

🌸 DESCRIPTION 🌸

Bestie, apbs is the calc queen 👑 It works out electrostatic potentials, energies, and forces, and it does it using both multigrid and finite element methods. It's literally giving main character energy ✨

💜 OPTIONS 💜

Okay so at the moment, these are the options that are supported 🙈

• --output-file=<name> — Turns on output logging and sends it to the path you put in <name>. If you skip --output-format, it uses the flat-file format by default 🍓
• --output-format=<type> — Lets you pick the logging format. The choices for <type> are either "xml" or "flat" 🫶
• --help — Shows the help info 💖
• --version — Shows which apbs version you're running ⭐

🧚 EXAMPLES 🧚

Here's a lowkey iconic example 🦋

apbs apbs.in > apbs.out 2> apbs.err

📚 CITATION 📚

Bestie, please cite APBS like this 🙏

    Baker NA, Sept D, Joseph S, Holst MJ, McCammon JA. Electrostatics of
    nanosystems: application to microtubules and the ribosome. Proc.
    Natl. Acad. Sci. USA 98, 10037-10041 2001.

🔗 SEE ALSO 🔗

For more info, read the user guide and/or the tutorial found online at http://apbs.wustl.edu/ 🌈

🫶 AUTHORS 🫶

apbs was written by Nathan A. Baker <baker@biochem.wustl.edu> 💜

This manual page was written by Daniel Leidert <daniel.leidert@wgdd.de> for the Debian project (but may be used by others) 🌸

That's the whole tea, bestie! ☕ This page belongs to the apbs source, dated July 2009, and it's still APBS(1) iconic 💅✨