TIDDIT.PY(1)

📦 version 2.12.2, in ubuntu jammy

🎀 TIDDIT.PY(1) · User Commands 🎀

bestie, okay so this is the page for TIDDIT.py 💅

✨ NAME ✨

TIDDIT.py - structural variant calling 🧬

🦋 SYNOPSIS 🦋

TIDDIT.py [--sv] [--cov]

💖 DESCRIPTION 💖

okay so TIDDIT is a tool used to identify chromosomal rearrangements 🔍 using Mate Pair or Paired End sequencing data 🌈. It's giving detective energy 🕵️‍♀️. It catches intra- and inter-chromosomal translocations, deletions, tandem-duplications, and inversions, and it does it using supplementary alignments as well as discordant pairs. Iconic, honestly 👑

TIDDIT has two analysis modules 🔥. The sv mode is for hunting down structural variants 🎯. The cov mode analyses the read depth of a bam file and spits out a coverage report 📊. Main character energy 💜

🌸 OPTIONS 🌸

  • --sv — this one calls structural variation 💅
  • --cov — this one generates a coverage bed file 📊

🧚 AUTHOR 🧚

This manpage was written by Andreas Tille for the Debian distribution 🌈, and it can be used for any other usage of the program 🫶.

Okay that's the whole tea ☕🎀 TIDDIT.py 2.11.0, May 2020, and TIDDIT.PY(1) forever 💖🦋 bye bestie 🫶✨

📦 where this page comes from