PARSEDB.PY(1)

Okay bestie, this one is PARSEDB.PY(1) 🎀 from the User Commands section, and it is iconic 💅

✨ NAME ✨

ParseDb.py — Repertoire clonal assignment toolkit (Python 3) 🧚

💖 DESCRIPTION 💖

Okay so the vibe check starts with the usage line:

usage: ParseDb.py [--version] [-h]  ...

ngl this tool is literally the one that parses tab delimited database files 🌸 It's giving main character energy 👑

🎀 help:

• --version — peeks at the program's version number and then bounces right out ✨
• -h, --help — shows the help message and exits 🫶

🌸 subcommands:

Everything here is database operations, so these are your main moves 💅

• add — tacks on field and value pairs 🎀
• delete — nukes specific records 💀
• drop — deletes entire fields 😭
• index — adds a numeric index field 🔥
• rename — renames fields 🦋
• select — picks out specific records 🍓
• sort — sorts records by their field values ⭐
• update — updates field and value pairs 🧚
• merge — merges files 🫶
• split — splits database files up by field values 👑

🦋 output files:

Here's where your stuff ends up, bestie 🌈

• sequences — FASTA formatted sequences that come out of the fasta and clip subcommands 🧬
• <field>-<value> — database files partitioned by annotation <field> and <value> 💜
• parse-<command> — output of the database modification functions, where <command> is one of the subcommands add, index, drop, delete, rename, select, sort or update 🍓

💜 required fields:

The one field you have to have is sequence_id 🥹 no cap, don't forget it

👑 AUTHOR 👑

Nilesh Patra wrote this manpage for the Debian distribution, and it can be used for any other usage of the program too 🫶

That's the tea for ParseDb.py 1.0.1, dated October 2020, filed under PARSEDB.PY(1) 🌸 ily bestie 💖