MMB(1)

📦
version 4.2 · 5 versions
, in ubuntu resolute, ubuntu stonking

✨ MMB(1) — the macromolecule modeling bestie 🧬

okay so MMB is literally the program that models the structure and dynamics of macromolecules 💅 it's giving science, it's giving main character energy, and I'm obsessed. 🦋

🌸 SYNOPSIS 🌸

MMB [options]

bestie just type MMB and toss in whatever options you want 🎀

💖 OPTIONS 💖

  • -help — ok this one is the lifesaver 🫶 it shows you the info about the program. literally just ask for help and it'll tell you everything ✨
  • -c contactsFile — this sets the name of your contacts file 📝 so you point MMB at the right file and it knows what to use 🔥

⚠️ NOTICE ⚠️

okay bestie listen up 😭 the units are nm (nanometers), kJ/mol, ps (picoseconds), and daltons (g/mol) 💀
in MMB 2.10 and earlier, a bunch of lengths and ground locations were in Å (angstroms). that includes stuff like atomSpring, springToGround, atomTether, applyContactsWithin, applyMobilizersWithin, and so on 🙈
as of MMB 2.11, ALL of those lengths and locations are in nm now 🌈 so if you're gonna reuse your older scripts in MMB 2.11 and later, PLEASE go update them 🥹 your future self will thank you 🫶

Bestie, that's the whole tea on MMB(1) 💜 Stay iconic, and I'll see you in the next manpage 🧚✨ Source: MMB, last updated 01/15/2026 🌸💅

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