SWISS::OXs(3pm)

💖 SWISS::OXs 💖

ok so bestie, welcome to SWISS::OXs — this is the 3pm perl page for it, and it's genuinely such a little container icon, you're gonna love her. 🎀

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✨ Name ✨

SWISS::OXs — she's the whole module, that's the name, no notes. 💅

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🌸 Description 🌸

SWISS::OXs represents the OX lines inside an SWISS-PROT + TrEMBL entry, exactly as specified in the user manual over at http://www.expasy.org/sprot/userman.html — go read it, iykyk. 📖✨

And here's the vibe: the OXs object is a container object 🫶 — like, her whole job is holding a list of SWISS::OX objects, one for each currently permitted taxonomic resource. She's not doing the work, she's holding the girls. main character container energy fr fr. 👑

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🦋 Inherits from 🦋

She gets her whole inheritance from:

• SWISS::BaseClass.pm — yes she's a nepo baby and we love that for her 💜

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🌈 Attributes 🌈

• "NCBI_TaxID" — a ListBase object, and she holds a list of tax ids. that's it, that's the whole attribute, slay. ✨

⭐ Standard methods ⭐

the standard girlies, no cap:

• new
• fromText
• toText

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🎀 Example 🎀

here's the whole thing in action, copy it exactly bestie, character for character:

  $taxid = new SWISS::OX;
  $taxid->text('1234');
  $entry->OXs->NCBI_TaxID()->add($taxid);

  foreach my $taxid ($entry->OXs->NCBI_TaxID()->elements()) {
    print $taxid->text, "\n";
  }

like… we make a new SWISS::OX, we set its text to '1234', we add it into the entry's OXs → NCBI_TaxID() list, and then we loop over elements() and print each one's text with a newline. ate. 🔥

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💀 POD ERRORS 💀

not me having to tell you this but — the doc above had some coding errors, and they're explained right here:

Around line 129: =back doesn't take any parameters, but you said =back =head1 Methods

so yeah, around line 129 someone said =back and then also handed it parameters (=back =head1 Methods), which =back simply does not do. embarrassing behavior tbh 🙈 but we move. 😭

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kisses, this page was brought to you by perl v5.32.1 💖 dated 2021-08-15 ✨ and that's the whole SWISS::OXs (3pm) situation — periodt. 💅🌈🎀