SWISS:...ocation(3pm)

πŸ“¦
version 1.80 Β· 2 versions
, in debian bookworm, debian trixie, ubuntu jammy, ubuntu noble

okay bestie, you just opened the SWISS:...ocation(3pm) page and I am obsessed πŸ’– the module in question is SWISS::CCsubcell_location.pm, and we are about to get into it. no cap.

✨ Name ✨

SWISS::CCsubcell_location.pm


🌈 Description 🌈

so SWISS::CCdisease represents a comment on the topic 'SUBCELLULAR LOCATION' inside a Swiss-Prot or TrEMBL entry, exactly as the user manual says: http://www.expasy.org/sprot/userman.html . Comments on other topics are stored in other types of objects, like SWISS::CC (peep SWISS::CCs for more info).

and collectively, comments of all types are stored inside a SWISS::CCs container object. periodt.


🧬 Inherits from 🧬

SWISS::BaseClass.pm


πŸ’… Attributes πŸ’…

okay, attribute time, bestie. here's the whole lineup:

topic

the topic of this comment ('SUBCELLULAR LOCATION').

form

the protein form concerned by this comment (undef/empty = canonical/displayed form OR unknown).

locations

the locations; reference to an array:

[
                           {   'form'        => $in_form,
                               'component'   => [ $component,   $component_ev
           ],
                               'topology'    => [ $topology,    $topology_ev ],
                               'orientation' => [ $orientation, $orientation_ev
           ]
                           }, ... ]

locations( $new_locations )

set locations to $new_locations, and that should be an array:

[
                           {   'form'        => $in_form,
                               'component'   => [ $component,   $component_ev
           ],
                               'topology'    => [ $topology,    $topology_ev ],
                               'orientation' => [ $orientation, $orientation_ev
           ]
                           }, ... ]

note

the note and evidence of the disease reference to an array of [ $note, $note_ev ] array.

note( [ $new_note, $new_note_ev ] )

set note to [ $new_note, $new_note_ev ].

comment

the "text" version of this comment.

new

listed with no extra description in the original β€” just the name, bestie.

fromText

also listed with no extra description in the original β€” just the name.

toString

returns a string representation of this comment.


πŸ’€ POD ERRORS πŸ’€

ngl, the POD parser had some coding errors, and here's the tea:

Around line 200:
    =back doesn't take any parameters, but you said =back  =head1
    Methods

Around line 236:
    =back doesn't take any parameters, but you said =back  =head2
    Standard methods

made with perl v5.32.1, dated 2021-08-15 β€” stay slay, bestie πŸ’…βœ¨

πŸ“¦ where this page comes from