SWISS:...aution(3pm)

📦
version 1.80 · 2 versions
, in debian bookworm, debian trixie, ubuntu jammy, ubuntu noble

✨ Name ✨

SWISS::CCinteraction — bestie, this is the little Perl class that handles the INTERACTION comment in a Swiss-Prot or TrEMBL entry 💖 (and yeah, the doc header up top says SWISS:...aution(3pm), from the User Contributed Perl Documentation collection, because manpage filenames are chaotic like that 🫠)

🌸 Description 🌸

SWISS::CCinteraction represents a comment on the topic 'INTERACTION' within a Swiss-Prot or TrEMBL entry, exactly as specified in the user manual at http://www.expasy.org/sprot/userman.html ✨

Comments on other topics do not live here — they're stored in other types of objects, like SWISS::CC (go peek at SWISS::CCs for more info on that whole situation 👀).

Collectively, comments of every type are stored inside a SWISS::CCs container object. One big happy comment family 🫶

Each element of the list is a hash with the following keys:

accession
identifier
xeno
NbExp
IntAct      (array reference)

Not me memorising that list, but also yes me memorising that list 💅

🧬 Inherits from 🧬

SWISS::ListBase.pm — it's giving legacy family tree energy, and we respect it 👑

👑 Attributes 👑

  • topic — the topic of this comment ('SEQUENCE CAUTION').
Okay so the doc literally says 'SEQUENCE CAUTION' right there in the topic attribute of the INTERACTION class, and I am simply reporting what it says, no cap 🙈
  • form — the protein form concerned by this comment. undef/empty means canonical/displayed form OR unknown. Mysterious. Iconic. Ambiguous queen ✨

🎀 Standard methods 🎀

  • new — makes a new one, as constructors do 💖
  • fromText — builds it out of text 🦋
  • toString — returns a string representation of this comment. Round trip vibes 🔁

💀 POD ERRORS 💀

Hey! The above document had some coding errors, which are explained below:

Around line 160:

=back doesn't take any parameters, but you said =back  =head1
Methods

The POD parser caught the typo and absolutely read you to filth for it 😭 lowkey deserved, highkey relatable, we've all been there.

And that's the whole page, bestie — written by the User Contributed Perl Documentation crew, running under perl v5.32.1, dated 2021-08-15 💜 go forth and parse those interactions, you absolute main character 🎀✨

📦 where this page comes from