SWISS:...ctivity(3pm)

✨ NAME ✨

SWISS::CCcatalytic_activity — bestie, this is the little Perl object that holds a CATALYTIC ACTIVITY comment from a Swiss-Prot or TrEMBL entry 💖 (it lives in the SWISS:...ctivity(3pm) corner of the User Contributed Perl Documentation, iykyk)

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🦋 DESCRIPTION 🦋

okay so. SWISS::CCcofactor represents a comment on the topic 'CATALYTIC ACTIVITY' within a Swiss-Prot or TrEMBL entry, exactly as specified in the user manual at http://www.expasy.org/sprot/userman.html ✨

Comments on other topics? They live in other types of objects, like SWISS::CC (peep SWISS::CCs for more info on that, bestie).

And collectively — every comment of every type — they all get stored inside a SWISS::CCs container object 🎀

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🌸 INHERITS FROM 🌸

SWISS::BaseClass — yes she got it from her mama 💅

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💖 ATTRIBUTES 💖

• topic — the topic of this comment, which is 'CATALYTIC ACTIVITY'. that's the whole vibe.
• form — the protein form that this comment is concerned with. undef/empty means canonical/displayed form OR unknown (mystery girl energy 🙈).
• comment — the "text" version of this comment, and heads up: this one comes without evidences and without new lines. clean. ✨
• activity_rhea — the rhea id (e.g. RHEA:18037) of the reaction. only for the new structured CC CATALYTIC ACTIVITY, no cap.
• activity_rhea( $new_rhea_id, $new_optional_reaction_ev ) — sets rhea activity to $new_rhea_id, and reaction ev to $new_optional_reaction_ev if you actually provided it. (only for new structured CC CATALYTIC ACTIVITY 💅)
• activity_reaction — the reaction txt, e.g. agmatine + H2O = N-carbamoylputrescine + NH4(+)
• activity_reaction( $new_reaction_txt ) — sets reaction txt to $new_reaction_txt. on the old unstructured format you could sneak an extra $ev in there too 👀
• activity_ec — the reaction EC, e.g. 3.5.3.12 ⭐
• activity_ec( $new_reaction_ec, , $new_optional_reaction_ev ) — sets reaction EC to $new_reaction_ec, and reaction ev to $new_optional_reaction_ev if provided. (only for new structured CC CATALYTIC ACTIVITY — and yes, that double comma is literally in there, don't @ me 😭)
• activity_participant — the reaction participants, as a String Array. e.g. [ "ChEBI:CHEBI:15377", "ChEBI:CHEBI:28938", "ChEBI:CHEBI:58145", "ChEBI:CHEBI:58318" ]. participants are shown as dbtype:id, so in "ChEBI:CHEBI:15377" the CheBI is the db type and CHEBI:15377 is the (CheBi) id 🧚 (only for new structured CC CATALYTIC ACTIVITY)
• activity_participant( $new_participant_array ) — sets reaction participants to $new_participant_array (an array of strings). (only for new structured CC CATALYTIC ACTIVITY 💜)
• directions — the directions: an Array of direction structures as a hash, e.g.

[ { 'txt' => 'left-to-right', 'rhea' => 'RHEA:16846', 'ev' => '{ECO:0000269|PubMed:29420286}' } ]

p.s. in well formed UniProtKB data 'txt' will be 'right-to-left' or 'left-to-right' (in that order); and there should be no more than 2 directions (minimum: 0) 🔥

• direction( $new_directions ) — sets the directions Array to $new_directions ... (only for new structured CC CATALYTIC ACTIVITY)
• new
• fromText
• toString — returns a string representation of this comment. she's giving stringified ✨

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👑 POD ERRORS 👑

Hey! The above document had some coding errors, which are explained below:

• Around line 293: =back doesn't take any parameters, but you said =back =head1 Methods 💀
• Around line 347: =back doesn't take any parameters, but you said =back =head2 Standard methods 😭

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and that's the whole page, bestie 🫶 this one came from the User Contributed Perl Documentation, written against perl v5.32.1, dated 2021-08-15. slay, go read some Swiss-Prot comments 💅🌈