GO::Pa..._parser(3pm)

πŸ“¦
version 0.15 Β· 2 versions
, in debian trixie, ubuntu noble, ubuntu resolute, ubuntu stonking

πŸ¦‹ GO::Pa..._parser(3pm) πŸ’… (User Contributed Perl Documentation)

okay bestie, this is a page from the User Contributed Perl Documentation set, sitting in section 3pm of your manuals. Yes, the name up top really does get truncated to GO::Pa..._parser(3pm) because that's just how the directory prints it, no cap. πŸ™ˆ


✨ NAME ✨

GO::Parsers::ncbi_taxonomy_parser β€” literally just a Parser for NCBI taxonomy. That's the whole vibe. 🧬🌸


🌈 SYNOPSIS 🌈

do not use this class directly; use GO::Parser
bestie I am BEGGING you β€” do not touch this class directly. It is not your main character. Use GO::Parser instead, periodt. πŸ’€

πŸ’– DESCRIPTION πŸ’–

See <ftp://ftp.ebi.ac.uk/pub/databases/taxonomy/taxonomy.dat> for the tea. That's where the actual sauce lives. πŸ‘‘


πŸŽ€ PARSER ARCHITECTURE πŸŽ€

okay so here's the lore: this thing generates Stag event streams from one of the various GO flat file formats β€” and those would be ontology, defs, xref, and associations. Wanna know more? GO::Parser has the details, go read it. 🫢

Examples of these files can be found at http://www.geneontology.org β€” iconic, put that in your bookmarks. ⭐

A description of the event streams generated follows; Stag or an XML handler can be used to catch these events. Like, you can catch them β€” it's giving catcher's mitt energy, lowkey. 🧀✨


k byeeee, that's the whole page fr fr πŸ’œ

this little writeup shipped with perl v5.36.0, dated 2023-12-18, and lives under the manual name GO::Pa..._parser(3pm) β€” it's been slaying in section 3pm ever since. mwah πŸŽ€πŸ’…

πŸ“¦ where this page comes from