GO::Pa..._parser(3pm)

πŸ“¦
version 0.15 Β· 2 versions
, in debian trixie, ubuntu noble, ubuntu resolute, ubuntu stonking

πŸ’– NAME πŸ’–

okay so bestie, this is GO::Parsers::go_xref_parser β€” it does syntax parsing of GO xref flat files (like eg2go, metacyc2go), and honestly? she's a specialist, she's booked, she's busy πŸ’…


✨ SYNOPSIS ✨

do not use this class directly; use GO::Parser
not me telling you to your face that you can't talk to this class directly 😭 she doesn't take walk-ins, she only works through GO::Parser. respect the receptionist, okay?

🌸 DESCRIPTION 🌸

so what does she actually do? she generates Stag event streams from one of the various GO flat file formats β€” that's ontology, defs, xref, and associations, the whole little friend group 🫢

for the deets, go see GO::Parser. fr fr, that's where the lore lives.

and if you wanna see examples of these files irl? they're hanging out at http://www.geneontology.org 🌈

now, a description of the event streams generated follows πŸ‘‡ β€” Stag or an XML handler can be used to catch these events, so pick your fighter and start catching ✨

πŸ¦‹ GO XREF FILES πŸ¦‹

these files have a filename *2go; for example, metacyc2go β€” the 2go on the end is the vibe check, iykyk πŸ‘‘

and here's the event stream shape, verbatim, no cap:

(dbxrefs
  (termdbxref+
    (termacc "s")
    (dbxref
      (xref_dbname "s")
      (xref_key "s"))))

look at that nesting. the way she said termdbxref+ and meant it. iconic πŸ’œ


πŸ‘‘ AUTHOR πŸ‘‘

so... the original page has this whole AUTHOR section and then just. nothing. empty. void. not a single name πŸ’€

like okay mystery queen, keep your secrets, we love a main character who refuses to be perceived πŸ™ˆ


and that's the whole page bestie!! ✨ this was GO::Pa..._parser(3pm) from the User Contributed Perl Documentation, living in perl v5.36.0, dated 2023-12-18 β€” mwah, no notes, slay, periodt πŸŽ€πŸ’–

πŸ“¦ where this page comes from