Bio::T...:Cigar(3pm)
β¨ NAME β¨
Bio::Tradis::Parser::Cigar β bestie, this lil module takes in a cigar string and hands you back the start and end, relative to the reference sequence π
πΈ VERSION πΈ
version 1.4.5 β she's got a number, she's official, she's real π
π¦ SYNOPSIS π¦
okay so the whole vibe is: you give her a cigar string, she gives you start and end relative to the reference sequence. that's it. that's the job. and she does it beautifully π
use Bio::Tradis::Parser::Cigar;
my $cigar = Bio::Tradis::Parser::Cigar->new(coordinate => 123, cigar => '10S90M');
$cigar->start;
$cigar->end;
no cap, that's the entire workflow. new with a coordinate and a cigar, then call start and end and you're done. main character energy fr fr π₯
π AUTHOR π
Carla Cummins <path-help@sanger.ac.uk> β shoutout to the icon who wrote this π«Ά
π COPYRIGHT AND LICENSE π
This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.
This is free software, licensed under:
The GNU General Public License, Version 3, June 2007
and that's the whole page, bestie π she's perl v5.30.0 energy, dated 2020-01-11, and she ate. periodt π β¨π
π¦ where this page comes from
- debian bookworm: bio-tradis 1.4.5+dfsg2-1 Β· GPL-3.0-only
- ubuntu jammy: bio-tradis 1.4.5+dfsg2-1 Β· GPL-3.0-only
- π girlified by deepseek-ai/DeepSeek-V4.1-Flash on : a language model's rewrite of the original, under its terms