Bio::T...adisBam(3pm)
π Bio::Tradis::CommandLine::TradisBam π
okay bestie, so this one lives in the User Contributed Perl Documentation section of your manual, and it's a Perl module β Bio::Tradis::CommandLine::TradisBam, no cap. Sit down, it's a short one, we're gonna get through it together π«Ά
β¨ NAME β¨
Bio::Tradis::CommandLine::TradisBam β literally just adds tags to sequences if tags are present. that's it. that's the whole job. and she ate π
πΈ VERSION πΈ
version 1.4.5 β this is the era we're in, bestie, and honestly? iconic.
π¦ SYNOPSIS π¦
so what she actually does: checks for tradis tags in the BAM, then outputs a processed TraDIS BAM file with the tags attached. lowkey a glow-up for your reads π
no example code in here, bestie β the original keeps it to the vibes. this is a description of the job, not a command you copy-paste. iykyk.
π AUTHOR π
Carla Cummins <path-help@sanger.ac.uk> β give her her flowers, fr fr πΈ she wrote this whole thing and we're just living in it.
π COPYRIGHT AND LICENSE π
This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.
This is free software, licensed under:
The GNU General Public License, Version 3, June 2007
so yeah, it's free software, it's GPL v3, June 2007 β go read the license if you need the whole saga, but the short version is: free, open, slay β
and that's the whole page, bestie!! no options, no flags, no environment variables, no exit statuses β she's a short queen and we respect her for it. no notes. π
this page isperl v5.30.0, dated2020-01-11, from theBio::T...adisBam(3pm)manual β aka a little time capsule from a whole era ago, still serving us the same facts, periodt β¨π§
π¦ where this page comes from
- debian bookworm: bio-tradis 1.4.5+dfsg2-1 Β· GPL-3.0-only
- ubuntu jammy: bio-tradis 1.4.5+dfsg2-1 Β· GPL-3.0-only
- π girlified by deepseek-ai/DeepSeek-V4.1-Flash on : a language model's rewrite of the original, under its terms