Bio::T...meters(3pm)

πŸ“¦
version 1.7.8 Β· 3 versions
, in debian bookworm, debian trixie, ubuntu jammy, ubuntu noble

✨ NAME ✨

Bio::Tools::Run::GenericParameters β€” it's giving "an object for the parameters used to run programs" πŸ’… like literally that's the whole job description and she does it flawlessly

(also bestie, this page lives in section 3pm of the manual, so if you ever need to find her again, that's the address πŸŽ€)


🌸 SYNOPSIS 🌸

my $void   = $obj->set_parameter("parameter_name","parameter_value");
my $value  = $obj->get_parameter("parameter_name");

okay so that's it, that's the whole vibe check right there ✨ you set a thing, you get a thing. iconic.


πŸ¦‹ DESCRIPTION πŸ¦‹

So basically, this is a basic container to hold the parameters used to run a program. no cap. she's a lil box, she holds ur params, she minds her business πŸ’–

heads up tho: this module may get incorporated into the more generic Bio::Tools::Run framework in the bioperl-run distribution. so like, future plans, not me starting drama, just saying what the docs say πŸ‘‘


πŸ’œ FEEDBACK πŸ’œ

🫢 Mailing Lists

User feedback is an integral part of the evolution of this and other Bioperl modules. fr fr, they want to hear from u. Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated. periodt.

bioperl-l@bioperl.org                  - General discussion
http://bioperl.org/wiki/Mailing_lists  - About the mailing lists

🧚 Support

Please direct usage questions or support issues to the mailing list:

bioperl-l@bioperl.org

rather than to the module maintainer directly. (yes bestie, the list first, not the maintainer's DMs πŸ™ˆ)

Many experienced and reponsive experts will be able look at the problem and quickly address it. Please include a thorough description of the problem with code and data examples if at all possible. like give them the whole story, not just "it's broken 😭" β€” receipts matter πŸ’…

πŸ› Reporting Bugs

Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the web:

https://github.com/bioperl/bioperl-live/issues

πŸ‘‘ AUTHOR - Chad Matsalla πŸ‘‘

Email bioinformatics1 at dieselwurks dot com


🌈 CONTRIBUTORS 🌈

Sendu Bala, bix@sendu.me.uk


⭐ APPENDIX ⭐

The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _ (iykyk, underscore = stay out of the kitchen unless ur the chef πŸ”₯)

πŸ’– get_parameter

Title   : get_parameter
Usage   : $parameter_object->get_parameter($param_name);
Function: Get the value of a parameter named $param_name
Returns : A scalar that should be a string
Args    : A scalar that should be a string

πŸ’– set_parameter

Title   : set_parameter
Usage   : $parameter_object->set_parameter($param_name => $param_value);
Function: Set the value of a parameter named $param_name to $param_value
Returns : Void
Args    : A hash containing name=>value pairs

πŸ’– available_parameters

Title   : available_parameters
Usage   : my @paramnames = $parameter_object->available_parameters
Function: Returns the names of the available parameters
Returns : list of available parameter names
Args    : none

bestie this was perl v5.32.1, dated 2021-08-15 β€” she ate and left absolutely no crumbs πŸ’…βœ¨ mwah, catch u in the next manpage πŸŽ€πŸ¦‹πŸ’–
πŸ“¦ where this page comes from