Bio::T...::Match(3pm)

💖 Bio::T...::Match(3pm) 💖

okay bestie, buckle up, because we're talking about Bio::T...::Match from the User Contributed Perl Documentation collection — yes, the manual name is literally abbreviated like that, she's mysterious, she's giving ✨enigmatic✨.

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🌸 NAME 🌸

Bio::Tools::Motif::Match — she represents a match as reported by the Bio::Tools::Motif module. that's it, that's the whole job, and she does it flawlessly 💅

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✨ SYNOPSIS ✨

so here's how you actually use her, no cap:

use Bio::Tools::Motif::Match;

# Create a new object.
$match = new Bio::Tools::Motif::Match(-motifid => 'P07110',
                                      -localization => 'OuterMembrane',
                                      -comment => 'FIMBRIAL_USHER Pattern',
                                      -start => 314,
                                      -end => 325);

# Accessor methods.
$val = $match->motif_id();
$val = $match->localization();
$val = $match->comment();
$val = $match->start();
$val = $match->end();

like, you spin up a fresh object with new, hand her a -motifid, a -localization, a -comment, a -start and an -end, and then you just… ask her things. the accessor methods are right there: motif_id(), localization(), comment(), start(), end(). every single one returns a value into $val. iconic behavior honestly 🎀

ngl the accessor names are the ones you'd guess from the constructor args — motif_id and motifid are lowkey twins but they're not the same string, so keep an eye on that when you're typing, bestie 🫶

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👑 AUTHOR 👑

this masterpiece was brought to you by Cory Spencer <cspencer@sfu.ca> — give her her flowers 💐

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🦋 SEE ALSO 🦋

• Bio::Tools::Motif — the main character this little match report belongs to, go read her too 💜

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🎀 ACKNOWLEGEMENTS 🎀

(shoutout to the original heading spelling, we respect the lore 🙈)

Thanks go out to Fiona Brinkman, Jennifer Gardy and the other members of the Simon Fraser University Brinkman laboratory. absolute legends, every one of them 🌈⭐

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and that's the whole vibe check, bestie. this page ships with perl v5.34.0 and it's dated 2022-02-06 — so if you're reading it, you're reading certified vintage documentation 💖✨ slay, periodt, go write some Perl 🧚