Bio::S...Handler(3pm)

💖 NAME 💖

Bio::SeqIO::game::gameHandler — no cap, it's the PerlSAX handler for game-XML, bestie 🎀

So like, the full manual name is Bio::S...Handler(3pm) (the page title got a lil truncated, it's giving mystery ✨), but the actual module is Bio::SeqIO::game::gameHandler. iykyk.

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✨ SYNOPSIS ✨

Okay so real talk: this module is not used directly. That's it, that's the synopsis. She's a backstage queen, main character energy from the wings 💅

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🦋 DESCRIPTION 🦋

Bio::SeqIO::game::gameHandler is the top-level XML handler that PerlSAX invokes. That's literally her whole job. She gets called, she handles, she slays 🌸

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🌈 FEEDBACK 🌈

💌 Mailing Lists

User feedback is, like, an integral part of the evolution of this and other Bioperl modules — fr fr, they actually want to hear from you 🫶. Send your comments and suggestions preferably to one of the Bioperl mailing lists.

Your participation is much appreciated. (They said it, not me, but it's true 💖)

bioperl-l@bioperl.org                  - General discussion
http://bioperl.org/wiki/Mailing_lists  - About the mailing lists

🫂 Support

Please direct usage questions or support issues to the mailing list:

bioperl-l@bioperl.org

...rather than to the module maintainer directly. Not being shady, it's just that many experienced and reponsive experts will be able look at the problem and quickly address it 👑. Please include a thorough description of the problem with code and data examples if at all possible. The more receipts the better, ngl 📝

🐛 Reporting Bugs

Report bugs to the Bioperl bug tracking system to help them keep track of the bugs and their resolution. Bug reports can be submitted via the web:

https://github.com/bioperl/bioperl-live/issues

Go off, file that bug, you're doing amazing sweetie 🐞💜

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🌟 AUTHOR - Sheldon McKay 🌟

Email mckays@cshl.edu

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🎀 APPENDIX 🎀

The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _ — that lil underscore is the "do not touch, she's internal" marker 🙈

🧚 start_document

Title   : start_document
Function: begin parsing the document

🧚 end_document

Title   : end_document
Function: finish parsing the document

🧚 load

Title   : load
Usage   : $seqs = $handler->load
Function: start parsing
Returns : a ref to a list of sequence objects
Args    : an optional flag to suppress <computation_analysis> elements (not used yet)

(Yes bestie, that flag is not used yet — she's aspirational, we respect it 💅)

🧚 s_game

Title   : s_game
Function: begin parsing game element

🧚 e_game

Title   : e_game
Function: process the game element

🧚 e_seq

Title   : e_seq
Function: process the sequence element

🧚 e_map_position

Title   : e_map_position
Function: process the map_position element

🧚 e_annotation

Title   : e_annotation
Function: process the annotation

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Okay that's the whole page, no crumbs left, every single method accounted for 💖

And that's a wrap, babe 🎬✨ This lil doc is from perl v5.32.1, dated 2021-08-15, and it lives in the Bio::S...Handler(3pm) section of the manual — thanks for reading, mwah 💋🌈