Bio::S...ltiFile(3pm)

✨ NAME ✨

Bio::SeqIO::MultiFile — treating a whole lil squad of files like one single input stream 💖 (the manual's called Bio::S...ltiFile(3pm), in case you were wondering, and it's part of the User Contributed Perl Documentation, periodt)

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🌸 SYNOPSIS 🌸

my $seqin = Bio::SeqIO::MultiFile->new( -format => 'Fasta',
                                        -files  => ['file1','file2'] );
while (my $seq = $seqin->next_seq) {
    # do something with $seq
}

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🦋 DESCRIPTION 🦋

Okay so Bio::SeqIO::MultiFile is literally the easiest way to bundle a whole set of identically formatted sequence input files together and treat them like one single stream ✨. You hand it a bunch of files, it hands you sequences, no drama, no cap.

And the file format? Bestie, you don't even have to tell it — it's automatically determined by Bio::SeqIO 💅.

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💬 FEEDBACK 💬

🎀 Mailing Lists 🎀

User feedback is an integral part of the evolution of this and other Bioperl modules, fr fr. Send your comments and suggestions preferably to one of the Bioperl mailing lists. Your participation is much appreciated 🫶.

bioperl-l@bioperl.org                  - General discussion
http://bioperl.org/wiki/Mailing_lists  - About the mailing lists

🩷 Support 🩷

Please direct usage questions or support issues to the mailing list:

bioperl-l@bioperl.org

rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address it. Please include a thorough description of the problem with code and data examples if at all possible 💜.

🐛 Reporting Bugs 🐛

Report bugs to the Bioperl bug tracking system to help us keep track the bugs and their resolution. Bug reports can be submitted via the web:

https://github.com/bioperl/bioperl-live/issues

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👑 AUTHOR — Ewan Birney 👑

Email birney@ebi.ac.uk

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📖 APPENDIX 📖

The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _ (iykyk, that underscore is the secret handshake 🙈).

⭐ next_seq

Title   : next_seq
Usage   :
Function:
Example :
Returns :
Args    :

⭐ next_primary_seq

Title   : next_primary_seq
Usage   :
Function:
Example :
Returns :
Args    :

⭐ _load_file

Title   : _load_file
Usage   :
Function:
Example :
Returns :
Args    :

⭐ _set_file

Title   : _set_file
Usage   :
Function:
Example :
Returns :
Args    :

⭐ _current_seqio

Title   : _current_seqio
Usage   : $obj->_current_seqio($newval)
Function:
Example :
Returns : value of _current_seqio
Args    : newvalue (optional)

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That's the whole page bestie, every last detail preserved, nothing skipped, nothing invented 💖 slay.

perl v5.32.1 · 2021-08-15 · Bio::S...ltiFile(3pm) — mwah, that's the source, the version and the date, all tucked into one cute lil sign-off 🎀✨