Bio::S...e::UTR(3pm)

πŸ“¦
version 1.7.8 Β· 3 versions
, in debian bookworm, debian trixie, ubuntu jammy, ubuntu noble

✨ NAME ✨

Bio::SeqFeature::Gene::UTR β€” a feature that's giving untranslated region, like it's literally part of a transcriptional unit πŸ’–

(this is the page for Bio::S...e::UTR(3pm), bestie, so you know you're in the right place 🫢)


πŸ¦‹ SYNOPSIS πŸ¦‹

See documentation of methods πŸ’…


🌸 DESCRIPTION 🌸

Okay so a UTR is a Bio::SeqFeature::Gene::ExonI compliant object, no cap β€” it's non-coding, and it can be either 5' or 3' in a transcript. That's the whole vibe. ✨


πŸ’¬ FEEDBACK πŸ’¬

πŸ’Œ Mailing Lists πŸ’Œ

Not me begging for your feedback because user feedback is an integral part of the evolution of this and other Bioperl modules πŸ₯Ή Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated, fr fr. πŸ’–

bioperl-l@bioperl.org                  - General discussion
http://bioperl.org/wiki/Mailing_lists  - About the mailing lists

🫢 Support 🫢

Please direct usage questions or support issues to the mailing list:

bioperl-l@bioperl.org

rather than to the module maintainer directly. The way that many experienced and reponsive experts will be able look at the problem and quickly address it?? Iconic. πŸ‘‘

Please include a thorough description of the problem with code and data examples if at all possible. πŸ™

πŸ› Reporting Bugs πŸ›

Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the web:

https://github.com/bioperl/bioperl-live/issues

πŸ‘‘ AUTHOR - David Block πŸ‘‘

Email dblock@gene.pbi.nrc.ca πŸ’œ


🌈 CONTRIBUTORS 🌈

This is based on the Gene Structure scaffolding erected by Hilmar Lapp (hlapp@gmx.net). Shoutout, legend behaviour. πŸŽ€


πŸ“– APPENDIX πŸ“–

The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _ β€” iykyk πŸ’…

🌟 new 🌟

Title   : new
Usage   :
Function: We override the constructor here to set is_coding to false
          unless explicitly overridden.

Example :
Returns :
Args    :

So yeah, we're overriding the constructor here to set is_coding to false unless you explicitly override it. Periodt. πŸ’–

🌟 primary_tag 🌟

Title   : primary_tag
Usage   : $tag = $feat->primary_tag()
Function: Returns the primary tag for a feature,
          eg 'utr5prime'.  This method insures that 5prime/3prime information
          is uniformly stored
Returns : a string
Args    : none

It returns the primary tag for a feature, eg 'utr5prime' β€” and this method insures that 5prime/3prime information is uniformly stored. Slay. ✨


perl v5.32.1 Β· 2021-08-15 β€” and that's the whole page, bestie, you ate it up πŸ’…πŸŽ€βœ¨πŸ¦‹

πŸ“¦ where this page comes from