Bio::S...Feature(3pm)

πŸ“¦
version 1.7.8 Β· 3 versions
, in debian bookworm, debian trixie, ubuntu jammy, ubuntu noble

πŸ’– Bio::S...Feature(3pm) β€” the non-coding feature tea πŸ’–

okay bestie, gather round, because this page is literally the documentation for Bio::SeqFeature::Gene::NC_Feature.pm from User Contributed Perl Documentation, and it's a whole mood. it's the superclass for non-coding features, and honestly? iconic behaviour. it knows it doesn't code for amino acids and it is thriving about it. 🧚


✨ NAME ✨

Bio::SeqFeature::Gene::NC_Feature.pm β€” the superclass for non-coding features. that's it, that's the whole name, slay. πŸ’…


🌸 SYNOPSIS 🌸

bestie, the synopsis is literally out here giving placeholder energy:

Give standard usage here

no cap, that's the entire thing. the author said "I'll fill this in later" and then... didn't. we respect the commitment to the bit. 🫢


πŸ¦‹ DESCRIPTION πŸ¦‹

and the description? also placeholder vibes, fr fr:

Describe the object here

it's giving "unfinished Google Doc from 2004" and honestly we love the honesty. πŸ”₯


πŸ“¬ FEEDBACK πŸ“¬

πŸ’Œ Mailing Lists πŸ’Œ

okay so user feedback is integral to the evolution of this and other Bioperl modules β€” like, the whole glow-up depends on you sending in your comments and suggestions, preferably to the Bioperl mailing list. your participation is much appreciated, and I mean that sincerely. πŸ₯Ή

🫢 Support 🫢

please, please, please direct your usage questions and support issues to the mailing list:

bioperl-l@bioperl.org

not the module maintainer directly, bestie. I'm begging. πŸ™ˆ

the reason is lowkey wholesome: there are so many experienced and responsive experts on the list who will look at your problem and quickly address it. the way that actually works is beautiful. 😭

and when you do ask β€” because you will β€” please include a thorough description of the problem with code and data examples if at all possible. thorough. description. code. data. examples. give them everything, leave nothing on the table. πŸ‘‘

πŸ› Reporting Bugs πŸ›

found a bug? report it to the Bioperl bug tracking system so they can keep track of the bugs and their resolution β€” the receipts matter. bug reports can be submitted via the web:

https://github.com/bioperl/bioperl-live/issues

go forth and file, queen. 🌈


πŸ‘‘ AUTHOR - David Block πŸ‘‘

Email: dblock@gnf.org

shoutout to David Block, the actual author, the main character of this file. πŸ’œ


πŸ“– APPENDIX πŸ“–

the rest of the documentation details each of the object methods. and heads up: internal methods are usually preceded with a _, so if you see an underscore, mind your business, that's private. πŸ™ˆ

is_coding

  • Title β€” is_coding
  • Usage β€”
if ($feature->is_coding()) {
    #do something
}
  • Function β€” whether or not the feature codes for amino acid
  • Returns β€” FALSE
  • Args β€” none

so yeah, spoiler alert: it returns FALSE. it's a non-coding feature, bestie, what did you expect? 😭

cds

  • Title β€” cds
  • Usage β€” $cds=$feature->cds();
  • Function β€” get the coding sequence of this feature
  • Returns β€” undef
  • Args β€” none

get the coding sequence of this feature and... it returns undef. the audacity. the drama. the consistency. πŸ’€


and that's the whole page, babes. this one shipped as part of perl v5.32.1, dated 2021-08-15, under the Bio::S...Feature(3pm) title in the User Contributed Perl Documentation set. go be non-coding and unbothered, periodt. πŸ’…βœ¨πŸŽ€

πŸ“¦ where this page comes from