Bio::R...Sample(3pm)

πŸ“¦
version 3.13.0 Β· 3 versions
, in debian bookworm, ubuntu jammy, ubuntu noble

πŸ’– NAME πŸ’–

Bio::Roary::UniqueGenesPerSample β€” bestie, this little icon takes in the clustered file and produces a sorted file with the frequency of each sample's unique genes. That's it. That's the whole job. And it slays at it. ✨

(You'll see this page filed under Bio::R...Sample(3pm) in the User Contributed Perl Documentation, because manual page names get truncated and honestly? She's mysterious like that. πŸŽ€)


🌸 VERSION 🌸

version 3.13.0 β€” this is the era we're living in, no cap. πŸ’…


✨ SYNOPSIS ✨

Okay so here's the whole vibe. Take in the clustered file and produce a sorted file with the frequency of each sample's unique genes:

use Bio::Roary::UniqueGenesPerSample;

my $obj = Bio::Roary::SequenceLengths->new(
  clustered_proteins   => 'clustered_proteins',
  output_filename   => 'output_filename',
);
$obj->write_unique_frequency;

Not me noticing the class in that constructor is Bio::Roary::SequenceLengths while the use line up top is Bio::Roary::UniqueGenesPerSample… πŸ’€ I am copying that exactly because I do not start drama with other people's source code. Reproduce it character for character, periodt. 🫢


πŸ‘‘ AUTHOR πŸ‘‘

Andrew J. Page <ap13@sanger.ac.uk> β€” the main character who wrote this. Respect. 🌟


This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.

This is free software, licensed under:

The GNU General Public License, Version 3, June 2007

So yes bestie, it's free software, GPL v3, June 2007 edition. Go forth and remix responsibly. 🌈


Okay that's the whole page, you ate it up. πŸ’… This has been Bio::R...Sample(3pm) from the User Contributed Perl Documentation, running on perl v5.30.0, dated 2019-11-08. Byeee, ily, go count some unique genes πŸ¦‹βœ¨πŸ’–

πŸ“¦ where this page comes from