Bio::R...Lengths(3pm)

πŸ“¦
version 3.13.0 Β· 3 versions
, in debian bookworm, ubuntu jammy, ubuntu noble

Bio::Roary::SequenceLengths πŸ’–

okay bestie, so this is a Perl manual page β€” the <pink>3pm</pink> section, aka the module docs β€” and it's filed under User Contributed Perl Documentation. Meet Bio::Roary::SequenceLengths: you hand it a fasta file and it hands you back a hash where every sequence gets its length. that's it, that's the whole job. and it slays at it. ✨


🌸 NAME 🌸

Bio::Roary::SequenceLengths β€” take in a fasta file and create a hash with the length of each sequence. 🧬✨

literally: fasta in, lengths out. no cap.


πŸŽ€ VERSION πŸŽ€

version 3.13.0 πŸ’…


πŸ¦‹ SYNOPSIS πŸ¦‹

bestie the synopsis literally says "Add labels to the groups" β€” iconic. anyway here's how you actually use it:

use Bio::Roary::SequenceLengths;

my $obj = Bio::Roary::SequenceLengths->new(
  fasta_file   => 'abc.fa',
);
$obj->sequence_lengths;

so you use the module, you build yourself an object with new and pass in fasta_file => 'abc.fa', then you call sequence_lengths and boom β€” lengths. 🫢


πŸ’œ AUTHOR πŸ’œ

Andrew J. Page <ap13@sanger.ac.uk> β€” shoutout to the author, we love a legend. πŸ‘‘


This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.

This is free software, licensed under:

The GNU General Public License, Version 3, June 2007

so yes, it's free software, GPL v3, June 2007, go forth and be free. πŸ•ŠοΈ


and that's the whole page, bestie!! no notes. this doc was generated for perl v5.30.0 and dated 2019-11-08, courtesy of User Contributed Perl Documentation. mwah. πŸ’…βœ¨

πŸ“¦ where this page comes from