Bio::R...utFiles(3pm)

πŸ“¦
version 3.13.0 Β· 3 versions
, in debian bookworm, ubuntu jammy, ubuntu noble

πŸ’… Bio::R...utFiles(3pm) β€” User Contributed Perl Documentation

okay bestie, so this is a Perl module from the User Contributed Perl Documentation section of the manual pages, and it's genuinely so useful, i need you to lock in for like two seconds 🫢


✨ NAME ✨

Bio::Roary::PrepareInputFiles β€” take in a mixture of FASTA and GFF input files and output FASTA proteomes only πŸ’–

like. it takes your chaotic lil mix of file types and gives you back just the FASTA proteomes. no cap.


πŸŽ€ VERSION πŸŽ€

version 3.13.0

(the version, the moment, the icon ✨)


πŸ¦‹ SYNOPSIS πŸ¦‹

Take in a mixture of FASTA and GFF input files and output FASTA proteomes only 🧚

use Bio::Roary::PrepareInputFiles;

my $obj = Bio::Roary::PrepareInputFiles->new(
  input_files   => ['abc.gff','ddd.faa'],
);
$obj->fasta_files;

the way that you just use it, build a lil $obj with your input_files arrayref (see how it's got abc.gff and ddd.faa in there β€” mixed formats, she does not care πŸ’…), and then call fasta_files on it… obsessed. that's it. that's the whole vibe. periodt.


πŸ‘‘ AUTHOR πŸ‘‘

Andrew J. Page <ap13@sanger.ac.uk> 🌸


This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.

This is free software, licensed under:

The GNU General Public License, Version 3, June 2007

so like, free software, GPL v3, June 2007 β€” iconic behaviour, we love a permissive-but-not-that-permissive king πŸ‘‘


okay and for the little sign-off moment πŸŽ€ this page is from perl v5.30.0, dated 2019-11-08, and it's the Bio::R...utFiles(3pm) page β€” yes the title is truncated in the manual header, that's just how the manpage do, no thoughts, head empty, still iconic πŸ’€βœ¨ bye bestie, go convert your proteomes πŸ¦‹πŸ’–

πŸ“¦ where this page comes from