Bio::R...neFiles(3pm)
π NAME π
Bio::Roary::LookupGeneFiles β bestie, this little icon takes in an ordering of genes plus a directory, and hands you back an ordered list of file locations. That's the whole job. It's giving personal shopper for gene files. ποΈβ¨
Oh and heads up, the manual name you're reading right now is Bio::R...neFiles(3pm) (yeah the title got truncated, she's mysterious like that π
).
β¨ VERSION β¨
version 3.13.0 π
πΈ SYNOPSIS πΈ
okay so take an ordering of genes and a directory, and get back an ordered list of file locations. no cap, that's it:
use Bio::Roary::LookupGeneFiles;
my $obj = Bio::Roary::LookupGeneFiles->new(
multifasta_directory => 'pan_genome_sequences',
ordered_genes => ['gene5','gene2','gene3'],
);
$obj->ordered_gene_files();
so you spin up your object with multifasta_directory pointing at 'pan_genome_sequences' and ordered_genes set to ['gene5','gene2','gene3'], and then you hit it with ->ordered_gene_files() and it's done. main character behavior fr fr π¦
π«Ά AUTHOR π«Ά
Andrew J. Page <ap13@sanger.ac.uk> π
π COPYRIGHT AND LICENSE π
This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute. π
This is free software, licensed under:
The GNU General Public License, Version 3, June 2007
and that's the whole page, bestie!! π this gem was rendered by perl v5.30.0 on 2019-11-08, and yes it really does sign itself Bio::R...neFiles(3pm) at the bottom. slay, go order some genes. ππβ¨
π¦ where this page comes from
- debian bookworm: roary 3.13.0+dfsg-1 Β· GPL-3.0-only
- ubuntu jammy: roary 3.13.0+dfsg-1 Β· GPL-3.0-only
- ubuntu noble: roary 3.13.0+dfsg-1 Β· GPL-3.0-only
- π girlified by deepseek-ai/DeepSeek-V4.1-Flash on : a language model's rewrite of the original, under its terms