Bio::R...romGFFs(3pm)

💖 NAME 💖

Bio::Roary::ExtractProteomeFromGFFs — bestie, it takes in GFF files and creates protein sequences in FASTA format. That's it, that's the whole gig ✨

This one lives in the User Contributed Perl Documentation corner of the manual-verse, under the name Bio::R...romGFFs(3pm) (the manual truncated it, not me, I would never do that to you 💅).

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🦋 VERSION 🦋

version 3.13.0 — yes she's v3.13.0 and she knows it 👑

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🎀 SYNOPSIS 🎀

okay so picture this: GFF files go in, protein sequences in FASTA format come out. Iconic.

use Bio::Roary::ExtractProteomeFromGFFs;

my $plot_groups_obj = Bio::Roary::ExtractProteomeFromGFFs->new(
    gff_files        => $fasta_files,
  );
$plot_groups_obj->fasta_files();

not me noticing the variable is literally named $plot_groups_obj when we're extracting proteomes, but we do not gatekeep, we do not rename, we copy exactly fr fr 🫶

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🌸 AUTHOR 🌸

Andrew J. Page <ap13@sanger.ac.uk> — the main character who wrote this, we stan 🙌

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👑 COPYRIGHT AND LICENSE 👑

This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.

This is free software, licensed under:

The GNU General Public License, Version 3, June 2007 ⭐

so yes bestie, you can use it, remix it, share it — just respect the GPLv3 energy, periodt 💜

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cute little sign-off because you made it to the bottom, mwah 💖 This page was rendered by perl v5.30.0 on 2019-11-08, and it's filed under Bio::R...romGFFs(3pm). Go extract some proteomes, you've got this 🌈🦋🍓