Bio::R...romGFF(3pm)

💖 NAME 💖

okay bestie, listen up — this is Bio::R...romGFF(3pm) (yes, the page header says Bio::R...romGFF(3pm) and we are keeping it exactly like that, no notes 💅), and what it does is literally this:

Bio::Roary::ExtractProteomeFromGFF — take in a GFF file and create protein sequences in FASTA format. that's the whole gig. that's the vibe. ✨

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🌸 VERSION 🌸

version 3.13.0

(iconic, timeless, no cap 🫶)

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✨ SYNOPSIS ✨

so like, the whole point is: you hand it GFF files and it hands you back protein sequences in FASTA format. it's giving "take in GFF files and create protein sequences in FASTA format". slay 🌈

use Bio::Roary::ExtractProteomeFromGFF;

my $obj = Bio::Roary::ExtractProteomeFromGFF->new(
    gff_file        => $fasta_file,
  );
$obj->fasta_file();

okay notice how the constructor takes gff_file, and yeah the variable on the right is called $fasta_file, that is genuinely what the original says, i am not touching it, not my business, we respect the source code's choices 🎀 and then you call $obj->fasta_file(); to get your FASTA. that's it. that's the whole main character moment. 👑

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🦋 AUTHOR 🦋

Andrew J. Page <ap13@sanger.ac.uk>

(the icon, the legend, the one who wrote it fr fr 💜)

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👑 COPYRIGHT AND LICENSE 👑

This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.

This is free software, licensed under:

The GNU General Public License, Version 3, June 2007

so yeah bestie, it's free software, GPL v3, June 2007 edition — go forth and remix responsibly 💅

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ngl there's no DESCRIPTION section and no OPTIONS section on this page. not hiding anything from you, that's literally the whole page. some manpages are just a quick little vibe check and this is one of them 💖

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and that's a wrap, gorgeous 🎀 this was Bio::R...romGFF(3pm), perl v5.30.0, dated 2019-11-08, from the User Contributed Perl Documentation. mwah. go extract some proteomes. 🧚‍♀️🌸