Bio::R...Blastp(3pm)

💖 NAME 💖

Bio::Roary::External::Blastp — bestie, it's literally a wrapper around NCBI's blastp command 🧬✨

She's the little glam middle-manager who takes your stuff, hands it to blastp, and doesn't make a whole thing of it. No cap.

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🌸 VERSION 🌸

version 3.13.0 — that's the one, that's the era we're living in 💅

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✨ SYNOPSIS ✨

Okay so, wrapper around NCBI's blastp command. Here's the whole vibe:

use Bio::Roary::External::Blastp;

my $blast_database= Bio::Roary::External::Blastp->new(
  fasta_file => 'contigs.fa',
  blast_database => 'db',
  exec       => 'blastp',
  output_file => 'results.out'
);

$blast_database->run();

Not me building the object and then just calling run() on it like it's nothing 🫶 she ate that fr fr.

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🦋 METHODS 🦋

💜 result_file

Returns the path to the results file. That's it, that's the whole method — short, sweet, iconic, main character energy, periodt 💖

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🎀 AUTHOR 🎀

Andrew J. Page <ap13@sanger.ac.uk> — thank you king, we stan 👑

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🌈 COPYRIGHT AND LICENSE 🌈

This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.

This is free software, licensed under:

The GNU General Public License, Version 3, June 2007

Free software?? We love a generous legend 🫶 legally iconic.

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okay so that's the whole page bestie 💖 this was written for perl v5.30.0 and dated 2019-11-08, and yes the manual name is Bio::R...Blastp(3pm) because the header only had room for so much. mwah 🎀✨