Bio::R...eGroups(3pm)

πŸ“¦
version 3.13.0 Β· 3 versions
, in debian bookworm, ubuntu jammy, ubuntu noble

πŸ’– Bio::R...eGroups(3pm) πŸ’–

okay bestie, gather round, because this is the perl man page for Bio::Roary::AnalyseGroups β€” yes the header truncates it all cute like Bio::R...eGroups(3pm), but we know her full name and we respect her 🫢


✨ NAME ✨

Bio::Roary::AnalyseGroups β€” she takes in a groups file plus the original FASTA files and makes you plots and stats. that's the whole job. no cap. πŸ“Š


🌸 VERSION 🌸

version 3.13.0 β€” that's the one, periodt.


πŸ¦‹ SYNOPSIS πŸ¦‹

literally what it says on the tin: take in a groups file and the original FASTA files, create plots and stats. here's how you'd actually do it:

use Bio::Roary::AnalyseGroups;

my $plot_groups_obj = Bio::Roary::AnalyseGroups->new(
    fasta_files      => $fasta_files,
    groups_filename  => $groups_filename,
    output_filename  => $output_filename
  );
$plot_groups_obj->create_plots();

like… you build the object, you call create_plots(), you get plots. main character energy fr fr πŸ’…


πŸ‘‘ AUTHOR πŸ‘‘

Andrew J. Page <ap13@sanger.ac.uk> β€” the icon who wrote this ✨


This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.

This is free software, licensed under:

The GNU General Public License, Version 3, June 2007

so yeah, it's free, it's GPL v3, June 2007 vibes. use her, share her, respect the license bestie 🫢


🌈 SEE ALSO 🌈

ngl there's no SEE ALSO section in this one β€” she's short and sweet and that's iconic of her πŸ’œ


and that's the whole page!! documented by User Contributed Perl Documentation, running on perl v5.30.0, dated 2019-11-08 β€” so like, this page is a little vintage but she still ate πŸ’– mwah, go make some plots πŸ“

πŸ“¦ where this page comes from