Bio::G...letters(3pm)

📦
version 2.40 · 2 versions
, in debian bookworm, debian trixie, ubuntu jammy, ubuntu noble

💖 Bio::G...letters(3pm) 💖

okay bestie, welcome to the Bio::G...letters page — that's the manpage name right there, straight outta the User Contributed Perl Documentation crew, and yes we are about to make a glyph manual make sense. 🎀

✨ NAME ✨

Bio::Graphics::Glyph::three_letters — it's a DAS-compatible package, and what it does is draw a whole line of little groups of three letters. iconic behavior honestly. 👑

🌸 SYNOPSIS 🌸

See L<Bio::Graphics::Panel> and L<Bio::Graphics::Glyph>.

like. that's it. go read those two, they're the main characters here. 💅

🦋 DESCRIPTION 🦋

So basically: this glyph draws groups of three letters, and it separates them with horizontal lines. that's the whole vibe. three letters, line, three letters, line. it's giving little beaded bracelet but for genomics. ✨

💜 OPTIONS 💜

on top of all the common options (iykyk), this glyph also recognizes these three glow-up options of its own:

  • -text — the three letters you want to show off. default is "CAG". so if you don't say anything, it's gonna be CAG-ing all over the place. 🧬
  • -width — how wide ONE letter group is. default is 20.
  • -interval — the gap between letter groups. default is 10.

and for the record, the original table looked like this, so you know the defaults are real:

Option      Description                  Default
------      -----------                  -------
-text       The three letters to show     "CAG"

-width      Width of one letter group     20

-interval   Interval between              10
            letter groups

💀 BUGS 💀

found a bug? please report them. don't just suffer in silence bestie, that's not the move. 🙈

🌈 SEE ALSO 🌈

okay this list is LONG and we are NOT skipping a single one of them, every single reference gets its moment:

  • Bio::Graphics::Panel
  • Bio::Graphics::Glyph
  • Bio::Graphics::Glyph::arrow
  • Bio::Graphics::Glyph::cds
  • Bio::Graphics::Glyph::crossbox
  • Bio::Graphics::Glyph::diamond
  • Bio::Graphics::Glyph::dna
  • Bio::Graphics::Glyph::dot
  • Bio::Graphics::Glyph::ellipse
  • Bio::Graphics::Glyph::extending_arrow
  • Bio::Graphics::Glyph::generic
  • Bio::Graphics::Glyph::graded_segments
  • Bio::Graphics::Glyph::heterogeneous_segments
  • Bio::Graphics::Glyph::line
  • Bio::Graphics::Glyph::pinsertion
  • Bio::Graphics::Glyph::primers
  • Bio::Graphics::Glyph::rndrect
  • Bio::Graphics::Glyph::segments
  • Bio::Graphics::Glyph::ruler_arrow
  • Bio::Graphics::Glyph::toomany
  • Bio::Graphics::Glyph::transcript
  • Bio::Graphics::Glyph::transcript2
  • Bio::Graphics::Glyph::translation
  • Bio::Graphics::Glyph::triangle
  • Bio::DB::GFF
  • Bio::SeqI
  • Bio::SeqFeatureI
  • Bio::Das
  • GD

the full roster. no crumbs left behind. ✨

👑 AUTHOR 👑

Vsevolod (Simon) Ilyushchenko <simonf@cshl.edu> — thank you for your service, legend. 🫶

Copyright (c) 2004 Cold Spring Harbor Laboratory

This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself. See DISCLAIMER.txt for disclaimers of warranty.

fr fr on the warranty thing — read DISCLAIMER.txt, no promises were made. 💀

and that's a wrap on this little page, written for perl v5.30.0, dated 2019-11-25 — mwah, go forth and draw your three letters, bestie. 🎀💖🌸

📦 where this page comes from