Bio::G...nscript(3pm)

📦
version 2.40 · 2 versions
, in debian bookworm, debian trixie, ubuntu jammy, ubuntu noble

💖 Bio::G...nscript — the sequence ontology transcript glyph 💖

okay bestie so we're looking at a Perl manual page here — Bio::G...nscript(3pm) — from the User Contributed Perl Documentation collection. she's short, she's sweet, she knows exactly what she is. let's get into it 🫶

✨ NAME ✨

Bio::Graphics::Glyph::so_transcript — the sequence ontology transcript glyph

like. the name literally tells you everything. a glyph. for so_transcripts. iconic behavior 💅

🌸 SYNOPSIS 🌸

See L<Bio::Graphics::Panel> and L<Bio::Graphics::Glyph>.

that's it. that's the whole synopsis. she said "go read the docs for my parents, i'm built different" 😭 and honestly? valid.

🦋 DESCRIPTION 🦋

so here's the tea ☕ — this is a sequence-ontology compatible glyph, and she works hand-in-hand with the so_transcript aggregator over in BioPerl. dynamic duo energy fr fr 👑

and the big reveal: this glyph is identical to "processed_transcript" — which gets described in excruciating detail over in Bio::Graphics::Glyph::processed_transcript. so if you want the full lore, that's where you go. this one's just the so-flavored twin. same face, different name tag. no cap. ✨

lowkey the move here is: if you already know processed_transcript, you already know this. if you don't, go read that page and then come back. we'll wait. 🎀

💀 BUGS 💀

Please report them.

that's the whole section. not me getting "Please report them." as a full bug policy 😭 it's giving "we know. we're aware. tell us anyway." Please report them, bestie. they're out there. 🙈

🌈 SEE ALSO 🌈

the whole friend group, in order:

  • Bio::Graphics::Panel
  • Bio::Graphics::Glyph
  • Bio::Graphics::Glyph::processed_transcript
  • Bio::DB::GFF::Aggregators::so_transcript
  • GD

go follow them all, they're all slaying in their own lanes 💜

👑 AUTHOR 👑

Lincoln Stein <lstein@cshl.org>

Copyright (c) 2005 Cold Spring Harbor Laboratory

This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself. See DISCLAIMER.txt for disclaimers of warranty.

like yes, royalty. 2005. cold spring harbor. the way this manpage has been sitting here being perfect for literal decades 🧚

one tiny legal-but-cute note: the license is literally "same terms as Perl itself," which is the most chill license in existence, but the DISCLAIMER.txt warranty disclaimer is still a whole real thing, so don't come for anybody if it breaks. 💖

and that's the page!! written by Lincoln Stein, copyright 2005 Cold Spring Harbor Laboratory, and this particular rendering comes to you from perl v5.30.0, dated 2019-11-25, filed under Bio::G...nscript(3pm). mwah 💋 stay glyphing, bestie 🍓✨

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