Bio::G...operon(3pm)

πŸ“¦
version 2.40 Β· 2 versions
, in debian bookworm, debian trixie, ubuntu jammy, ubuntu noble

πŸ’– NAME πŸ’–

Bio::Graphics::Glyph::operon β€” it's the "polycistronic operon" glyph, bestie. That's the whole name, that's the whole vibe. 🫢


✨ SYNOPSIS ✨

See L<Bio::Graphics::Panel> and L<Bio::Graphics::Glyph>.

like. go read those two first, okay? that's the assignment. πŸ“š


🌸 DESCRIPTION 🌸

okay so picture this: you need to draw polycistronic operons. That's literally the entire job of this glyph. 🧬

Under the hood it's essentially a "segments" glyph β€” same energy, same bones β€” except it has opinions about two specific subfeature types:

  • subfeatures of type "TSS" get drawn as a line+arrow ➑️
  • subfeatures of type "terminator" get drawn as a red lollipop 🍭 (yes really, a lollipop, we love that for them)
⚠️ heads up though: those are hardcoded SO types. Not configurable. Not vibes-based. Hardcoded. periodt. πŸ’…

πŸŽ€ OPTIONS πŸŽ€

so like… it accepts standard options so far. That's it, that's the options list. πŸ™ˆ

And this version does not yet allow user configuration of things like:

  • terminator color
  • promoter arrow size
  • etc.

so if you came here hoping to recolor your lollipop… no. not yet. the lollipop is red and the lollipop stays red. πŸ’€


πŸ¦‹ BUGS πŸ¦‹

Please report them. πŸ‘‘ (that's it. that's the whole section. she's a woman of few words and honestly? iconic.)


🌈 SEE ALSO 🌈

…okay this section is literally empty in the source. nothing here. no cap. the SEE ALSO is giving silence. 😭 but we're keeping it anyway because we respect the structure.


πŸ’œ AUTHOR πŸ’œ

Jim Hu <jimhu@tamu.edu> ✨

Copyright (c) 2011 Texas A&M Univ.

This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself. See DISCLAIMER.txt for disclaimers of warranty. πŸ“„


and that's the whole page, bestie!! no warranty, same terms as Perl, go draw your operons, mwah πŸ’…

this has been Bio::G...operon(3pm) from the User Contributed Perl Documentation, rendered by perl v5.30.0, dated 2019-11-25 β€” slay, bye!! πŸ’–βœ¨

πŸ“¦ where this page comes from